Gene : Lsat_1_v5_gn_8_160280 L. sativa V8
Defline:  (1 of 6) PTHR12383//PTHR12383:SF15 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED // THYLAKOIDAL PROCESSING PEPTIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  4702
Name:  ? Lsat_1_v5_gn_8_160280 Secondary Identifier:  ? PAC:38951410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_160280 0.5kb upstream 0.5kb upstream 4333   true Lsat_1_v8_lg_8: 284165771-284170103 Lactuca sativa
Lsat_1_v5_gn_8_160280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 284169604-284170103 Lactuca sativa
Lsat_1_v5_gn_8_160280 0.5kb downstream 0.5kb downstream 4333   true Lsat_1_v8_lg_8: 284165271-284169603 Lactuca sativa
Lsat_1_v5_gn_8_160280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 284165271-284165770 Lactuca sativa
Lsat_1_v5_gn_8_160280 1.0kb upstream 1.0kb upstream 4833   true Lsat_1_v8_lg_8: 284165771-284170603 Lactuca sativa
Lsat_1_v5_gn_8_160280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 284169604-284170603 Lactuca sativa
Lsat_1_v5_gn_8_160280 1.0kb downstream 1.0kb downstream 4833   true Lsat_1_v8_lg_8: 284164771-284169603 Lactuca sativa
Lsat_1_v5_gn_8_160280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 284164771-284165770 Lactuca sativa
Lsat_1_v5_gn_8_160280 2.0kb upstream 2.0kb upstream 5833   true Lsat_1_v8_lg_8: 284165771-284171603 Lactuca sativa
Lsat_1_v5_gn_8_160280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 284169604-284171603 Lactuca sativa
Lsat_1_v5_gn_8_160280 2.0kb downstream 2.0kb downstream 5833   true Lsat_1_v8_lg_8: 284163771-284169603 Lactuca sativa
Lsat_1_v5_gn_8_160280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 284163771-284165770 Lactuca sativa
Lsat_1_v5_gn_8_160280 5.0kb upstream 5.0kb upstream 8833   true Lsat_1_v8_lg_8: 284165771-284174603 Lactuca sativa
Lsat_1_v5_gn_8_160280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 284169604-284174603 Lactuca sativa
Lsat_1_v5_gn_8_160280 5.0kb downstream 5.0kb downstream 8833   true Lsat_1_v8_lg_8: 284160771-284169603 Lactuca sativa
Lsat_1_v5_gn_8_160280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 284160771-284165770 Lactuca sativa
Lsat_1_v5_gn_8_160280 10.0kb upstream 10.0kb upstream 13833   true Lsat_1_v8_lg_8: 284165771-284179603 Lactuca sativa
Lsat_1_v5_gn_8_160280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 284169604-284179603 Lactuca sativa
Lsat_1_v5_gn_8_160280 10.0kb downstream 10.0kb downstream 13833   true Lsat_1_v8_lg_8: 284155771-284169603 Lactuca sativa
Lsat_1_v5_gn_8_160280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 284155771-284165770 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471194 5263 Asterids View MSA
123747244 5271 Pentapetalae View MSA
122789106 5272 Eudicot View MSA
122046589 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain