Gene : Lsat_1_v5_gn_8_161801 L. sativa V8
Defline:  (1 of 6) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  4722
Name:  ? Lsat_1_v5_gn_8_161801 Secondary Identifier:  ? PAC:38951850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_161801 0.5kb upstream 0.5kb upstream 3104   true Lsat_1_v8_lg_8: 287287907-287291010 Lactuca sativa
Lsat_1_v5_gn_8_161801 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 287287907-287288406 Lactuca sativa
Lsat_1_v5_gn_8_161801 0.5kb downstream 0.5kb downstream 3104   true Lsat_1_v8_lg_8: 287288407-287291510 Lactuca sativa
Lsat_1_v5_gn_8_161801 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 287291011-287291510 Lactuca sativa
Lsat_1_v5_gn_8_161801 1.0kb upstream 1.0kb upstream 3604   true Lsat_1_v8_lg_8: 287287407-287291010 Lactuca sativa
Lsat_1_v5_gn_8_161801 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 287287407-287288406 Lactuca sativa
Lsat_1_v5_gn_8_161801 1.0kb downstream 1.0kb downstream 3604   true Lsat_1_v8_lg_8: 287288407-287292010 Lactuca sativa
Lsat_1_v5_gn_8_161801 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 287291011-287292010 Lactuca sativa
Lsat_1_v5_gn_8_161801 2.0kb upstream 2.0kb upstream 4604   true Lsat_1_v8_lg_8: 287286407-287291010 Lactuca sativa
Lsat_1_v5_gn_8_161801 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 287286407-287288406 Lactuca sativa
Lsat_1_v5_gn_8_161801 2.0kb downstream 2.0kb downstream 4604   true Lsat_1_v8_lg_8: 287288407-287293010 Lactuca sativa
Lsat_1_v5_gn_8_161801 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 287291011-287293010 Lactuca sativa
Lsat_1_v5_gn_8_161801 5.0kb upstream 5.0kb upstream 7604   true Lsat_1_v8_lg_8: 287283407-287291010 Lactuca sativa
Lsat_1_v5_gn_8_161801 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 287283407-287288406 Lactuca sativa
Lsat_1_v5_gn_8_161801 5.0kb downstream 5.0kb downstream 7604   true Lsat_1_v8_lg_8: 287288407-287296010 Lactuca sativa
Lsat_1_v5_gn_8_161801 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 287291011-287296010 Lactuca sativa
Lsat_1_v5_gn_8_161801 10.0kb upstream 10.0kb upstream 12604   true Lsat_1_v8_lg_8: 287278407-287291010 Lactuca sativa
Lsat_1_v5_gn_8_161801 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 287278407-287288406 Lactuca sativa
Lsat_1_v5_gn_8_161801 10.0kb downstream 10.0kb downstream 12604   true Lsat_1_v8_lg_8: 287288407-287301010 Lactuca sativa
Lsat_1_v5_gn_8_161801 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 287291011-287301010 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121448239 5263 Asterids Singleton cluster - no MSA
123741891 5271 Pentapetalae View MSA
122797003 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain