Gene : Lsat_1_v5_gn_8_16361 L. sativa V8
Defline:  (1 of 6) PTHR13251 - EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 Genomic Order:  562
Name:  ? Lsat_1_v5_gn_8_16361 Secondary Identifier:  ? PAC:38955796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_16361 0.5kb upstream 0.5kb upstream 1454   true Lsat_1_v8_lg_8: 21678561-21680014 Lactuca sativa
Lsat_1_v5_gn_8_16361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 21678561-21679060 Lactuca sativa
Lsat_1_v5_gn_8_16361 0.5kb downstream 0.5kb downstream 1454   true Lsat_1_v8_lg_8: 21679061-21680514 Lactuca sativa
Lsat_1_v5_gn_8_16361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 21680015-21680514 Lactuca sativa
Lsat_1_v5_gn_8_16361 1.0kb upstream 1.0kb upstream 1954   true Lsat_1_v8_lg_8: 21678061-21680014 Lactuca sativa
Lsat_1_v5_gn_8_16361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 21678061-21679060 Lactuca sativa
Lsat_1_v5_gn_8_16361 1.0kb downstream 1.0kb downstream 1954   true Lsat_1_v8_lg_8: 21679061-21681014 Lactuca sativa
Lsat_1_v5_gn_8_16361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 21680015-21681014 Lactuca sativa
Lsat_1_v5_gn_8_16361 2.0kb upstream 2.0kb upstream 2954   true Lsat_1_v8_lg_8: 21677061-21680014 Lactuca sativa
Lsat_1_v5_gn_8_16361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 21677061-21679060 Lactuca sativa
Lsat_1_v5_gn_8_16361 2.0kb downstream 2.0kb downstream 2954   true Lsat_1_v8_lg_8: 21679061-21682014 Lactuca sativa
Lsat_1_v5_gn_8_16361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 21680015-21682014 Lactuca sativa
Lsat_1_v5_gn_8_16361 5.0kb upstream 5.0kb upstream 5954   true Lsat_1_v8_lg_8: 21674061-21680014 Lactuca sativa
Lsat_1_v5_gn_8_16361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 21674061-21679060 Lactuca sativa
Lsat_1_v5_gn_8_16361 5.0kb downstream 5.0kb downstream 5954   true Lsat_1_v8_lg_8: 21679061-21685014 Lactuca sativa
Lsat_1_v5_gn_8_16361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 21680015-21685014 Lactuca sativa
Lsat_1_v5_gn_8_16361 10.0kb upstream 10.0kb upstream 10954   true Lsat_1_v8_lg_8: 21669061-21680014 Lactuca sativa
Lsat_1_v5_gn_8_16361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 21669061-21679060 Lactuca sativa
Lsat_1_v5_gn_8_16361 10.0kb downstream 10.0kb downstream 10954   true Lsat_1_v8_lg_8: 21679061-21690014 Lactuca sativa
Lsat_1_v5_gn_8_16361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 21680015-21690014 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780425 5273 Angiosperm View MSA
121450618 5263 Asterids View MSA
123746222 5271 Pentapetalae View MSA
122771826 5272 Eudicot View MSA
121052037 5274 Embryophyte View MSA
123092100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain