Gene : Lsat_1_v5_gn_8_17741 L. sativa V8
Defline:  (1 of 2) PTHR10044//PTHR10044:SF127 - INHIBITOR OF APOPTOSIS // RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  730
Name:  ? Lsat_1_v5_gn_8_17741 Secondary Identifier:  ? PAC:38955793
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_17741 0.5kb upstream 0.5kb upstream 4412   true Lsat_1_v8_lg_8: 27487026-27491437 Lactuca sativa
Lsat_1_v5_gn_8_17741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 27490938-27491437 Lactuca sativa
Lsat_1_v5_gn_8_17741 0.5kb downstream 0.5kb downstream 4412   true Lsat_1_v8_lg_8: 27486526-27490937 Lactuca sativa
Lsat_1_v5_gn_8_17741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 27486526-27487025 Lactuca sativa
Lsat_1_v5_gn_8_17741 1.0kb upstream 1.0kb upstream 4912   true Lsat_1_v8_lg_8: 27487026-27491937 Lactuca sativa
Lsat_1_v5_gn_8_17741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 27490938-27491937 Lactuca sativa
Lsat_1_v5_gn_8_17741 1.0kb downstream 1.0kb downstream 4912   true Lsat_1_v8_lg_8: 27486026-27490937 Lactuca sativa
Lsat_1_v5_gn_8_17741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 27486026-27487025 Lactuca sativa
Lsat_1_v5_gn_8_17741 2.0kb upstream 2.0kb upstream 5912   true Lsat_1_v8_lg_8: 27487026-27492937 Lactuca sativa
Lsat_1_v5_gn_8_17741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 27490938-27492937 Lactuca sativa
Lsat_1_v5_gn_8_17741 2.0kb downstream 2.0kb downstream 5912   true Lsat_1_v8_lg_8: 27485026-27490937 Lactuca sativa
Lsat_1_v5_gn_8_17741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 27485026-27487025 Lactuca sativa
Lsat_1_v5_gn_8_17741 5.0kb upstream 5.0kb upstream 8912   true Lsat_1_v8_lg_8: 27487026-27495937 Lactuca sativa
Lsat_1_v5_gn_8_17741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 27490938-27495937 Lactuca sativa
Lsat_1_v5_gn_8_17741 5.0kb downstream 5.0kb downstream 8912   true Lsat_1_v8_lg_8: 27482026-27490937 Lactuca sativa
Lsat_1_v5_gn_8_17741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 27482026-27487025 Lactuca sativa
Lsat_1_v5_gn_8_17741 10.0kb upstream 10.0kb upstream 13912   true Lsat_1_v8_lg_8: 27487026-27500937 Lactuca sativa
Lsat_1_v5_gn_8_17741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 27490938-27500937 Lactuca sativa
Lsat_1_v5_gn_8_17741 10.0kb downstream 10.0kb downstream 13912   true Lsat_1_v8_lg_8: 27477026-27490937 Lactuca sativa
Lsat_1_v5_gn_8_17741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 27477026-27487025 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468261 5263 Asterids View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain