Gene : Lsat_1_v5_gn_8_19261 L. sativa V8
Defline:  (1 of 1) PF00119//PF00318 - ATP synthase A chain (ATP-synt_A) // Ribosomal protein S2 (Ribosomal_S2) Genomic Order:  664
Name:  ? Lsat_1_v5_gn_8_19261 Secondary Identifier:  ? PAC:38954376
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7219 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_19261 0.5kb upstream 0.5kb upstream 2270   true Lsat_1_v8_lg_8: 25325872-25328141 Lactuca sativa
Lsat_1_v5_gn_8_19261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 25327642-25328141 Lactuca sativa
Lsat_1_v5_gn_8_19261 0.5kb downstream 0.5kb downstream 2270   true Lsat_1_v8_lg_8: 25325372-25327641 Lactuca sativa
Lsat_1_v5_gn_8_19261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 25325372-25325871 Lactuca sativa
Lsat_1_v5_gn_8_19261 1.0kb upstream 1.0kb upstream 2770   true Lsat_1_v8_lg_8: 25325872-25328641 Lactuca sativa
Lsat_1_v5_gn_8_19261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 25327642-25328641 Lactuca sativa
Lsat_1_v5_gn_8_19261 1.0kb downstream 1.0kb downstream 2770   true Lsat_1_v8_lg_8: 25324872-25327641 Lactuca sativa
Lsat_1_v5_gn_8_19261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 25324872-25325871 Lactuca sativa
Lsat_1_v5_gn_8_19261 2.0kb upstream 2.0kb upstream 3770   true Lsat_1_v8_lg_8: 25325872-25329641 Lactuca sativa
Lsat_1_v5_gn_8_19261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 25327642-25329641 Lactuca sativa
Lsat_1_v5_gn_8_19261 2.0kb downstream 2.0kb downstream 3770   true Lsat_1_v8_lg_8: 25323872-25327641 Lactuca sativa
Lsat_1_v5_gn_8_19261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 25323872-25325871 Lactuca sativa
Lsat_1_v5_gn_8_19261 5.0kb upstream 5.0kb upstream 6770   true Lsat_1_v8_lg_8: 25325872-25332641 Lactuca sativa
Lsat_1_v5_gn_8_19261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 25327642-25332641 Lactuca sativa
Lsat_1_v5_gn_8_19261 5.0kb downstream 5.0kb downstream 6770   true Lsat_1_v8_lg_8: 25320872-25327641 Lactuca sativa
Lsat_1_v5_gn_8_19261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 25320872-25325871 Lactuca sativa
Lsat_1_v5_gn_8_19261 10.0kb upstream 10.0kb upstream 11770   true Lsat_1_v8_lg_8: 25325872-25337641 Lactuca sativa
Lsat_1_v5_gn_8_19261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 25327642-25337641 Lactuca sativa
Lsat_1_v5_gn_8_19261 10.0kb downstream 10.0kb downstream 11770   true Lsat_1_v8_lg_8: 25315872-25327641 Lactuca sativa
Lsat_1_v5_gn_8_19261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 25315872-25325871 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
121448607 5263 Asterids Singleton cluster - no MSA
123752003 5271 Pentapetalae View MSA
122795153 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain