Gene : Lsat_1_v5_gn_8_2181 L. sativa V8
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  64
Name:  ? Lsat_1_v5_gn_8_2181 Secondary Identifier:  ? PAC:38953533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_2181 0.5kb upstream 0.5kb upstream 3862   true Lsat_1_v8_lg_8: 3241522-3245383 Lactuca sativa
Lsat_1_v5_gn_8_2181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 3241522-3242021 Lactuca sativa
Lsat_1_v5_gn_8_2181 0.5kb downstream 0.5kb downstream 3862   true Lsat_1_v8_lg_8: 3242022-3245883 Lactuca sativa
Lsat_1_v5_gn_8_2181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 3245384-3245883 Lactuca sativa
Lsat_1_v5_gn_8_2181 1.0kb upstream 1.0kb upstream 4362   true Lsat_1_v8_lg_8: 3241022-3245383 Lactuca sativa
Lsat_1_v5_gn_8_2181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 3241022-3242021 Lactuca sativa
Lsat_1_v5_gn_8_2181 1.0kb downstream 1.0kb downstream 4362   true Lsat_1_v8_lg_8: 3242022-3246383 Lactuca sativa
Lsat_1_v5_gn_8_2181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 3245384-3246383 Lactuca sativa
Lsat_1_v5_gn_8_2181 2.0kb upstream 2.0kb upstream 5362   true Lsat_1_v8_lg_8: 3240022-3245383 Lactuca sativa
Lsat_1_v5_gn_8_2181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 3240022-3242021 Lactuca sativa
Lsat_1_v5_gn_8_2181 2.0kb downstream 2.0kb downstream 5362   true Lsat_1_v8_lg_8: 3242022-3247383 Lactuca sativa
Lsat_1_v5_gn_8_2181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 3245384-3247383 Lactuca sativa
Lsat_1_v5_gn_8_2181 5.0kb upstream 5.0kb upstream 8362   true Lsat_1_v8_lg_8: 3237022-3245383 Lactuca sativa
Lsat_1_v5_gn_8_2181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 3237022-3242021 Lactuca sativa
Lsat_1_v5_gn_8_2181 5.0kb downstream 5.0kb downstream 8362   true Lsat_1_v8_lg_8: 3242022-3250383 Lactuca sativa
Lsat_1_v5_gn_8_2181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 3245384-3250383 Lactuca sativa
Lsat_1_v5_gn_8_2181 10.0kb upstream 10.0kb upstream 13362   true Lsat_1_v8_lg_8: 3232022-3245383 Lactuca sativa
Lsat_1_v5_gn_8_2181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 3232022-3242021 Lactuca sativa
Lsat_1_v5_gn_8_2181 10.0kb downstream 10.0kb downstream 13362   true Lsat_1_v8_lg_8: 3242022-3255383 Lactuca sativa
Lsat_1_v5_gn_8_2181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 3245384-3255383 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479092 5263 Asterids View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain