Gene : Lsat_1_v5_gn_8_23040 L. sativa V8
Defline:  (1 of 1) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  751
Name:  ? Lsat_1_v5_gn_8_23040 Secondary Identifier:  ? PAC:38950216
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa SER-GLYSYN-PWY Lactuca sativa pathologic  
Lsativa SERSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_23040 0.5kb upstream 0.5kb upstream 2315   true Lsat_1_v8_lg_8: 28379101-28381415 Lactuca sativa
Lsat_1_v5_gn_8_23040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 28379101-28379600 Lactuca sativa
Lsat_1_v5_gn_8_23040 0.5kb downstream 0.5kb downstream 2315   true Lsat_1_v8_lg_8: 28379601-28381915 Lactuca sativa
Lsat_1_v5_gn_8_23040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 28381416-28381915 Lactuca sativa
Lsat_1_v5_gn_8_23040 1.0kb upstream 1.0kb upstream 2815   true Lsat_1_v8_lg_8: 28378601-28381415 Lactuca sativa
Lsat_1_v5_gn_8_23040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 28378601-28379600 Lactuca sativa
Lsat_1_v5_gn_8_23040 1.0kb downstream 1.0kb downstream 2815   true Lsat_1_v8_lg_8: 28379601-28382415 Lactuca sativa
Lsat_1_v5_gn_8_23040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 28381416-28382415 Lactuca sativa
Lsat_1_v5_gn_8_23040 2.0kb upstream 2.0kb upstream 3815   true Lsat_1_v8_lg_8: 28377601-28381415 Lactuca sativa
Lsat_1_v5_gn_8_23040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 28377601-28379600 Lactuca sativa
Lsat_1_v5_gn_8_23040 2.0kb downstream 2.0kb downstream 3815   true Lsat_1_v8_lg_8: 28379601-28383415 Lactuca sativa
Lsat_1_v5_gn_8_23040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 28381416-28383415 Lactuca sativa
Lsat_1_v5_gn_8_23040 5.0kb upstream 5.0kb upstream 6815   true Lsat_1_v8_lg_8: 28374601-28381415 Lactuca sativa
Lsat_1_v5_gn_8_23040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 28374601-28379600 Lactuca sativa
Lsat_1_v5_gn_8_23040 5.0kb downstream 5.0kb downstream 6815   true Lsat_1_v8_lg_8: 28379601-28386415 Lactuca sativa
Lsat_1_v5_gn_8_23040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 28381416-28386415 Lactuca sativa
Lsat_1_v5_gn_8_23040 10.0kb upstream 10.0kb upstream 11815   true Lsat_1_v8_lg_8: 28369601-28381415 Lactuca sativa
Lsat_1_v5_gn_8_23040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 28369601-28379600 Lactuca sativa
Lsat_1_v5_gn_8_23040 10.0kb downstream 10.0kb downstream 11815   true Lsat_1_v8_lg_8: 28379601-28391415 Lactuca sativa
Lsat_1_v5_gn_8_23040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 28381416-28391415 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473197 5263 Asterids View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain