Gene : Lsat_1_v5_gn_8_24121 L. sativa V8
Defline:  (1 of 2) 2.1.1.95 - Tocopherol O-methyltransferase Genomic Order:  794
Name:  ? Lsat_1_v5_gn_8_24121 Secondary Identifier:  ? PAC:38954620
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1422 Lactuca sativa pathologic  
Lsativa PWY-7436 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_24121 0.5kb upstream 0.5kb upstream 2626   true Lsat_1_v8_lg_8: 29798420-29801045 Lactuca sativa
Lsat_1_v5_gn_8_24121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 29800546-29801045 Lactuca sativa
Lsat_1_v5_gn_8_24121 0.5kb downstream 0.5kb downstream 2626   true Lsat_1_v8_lg_8: 29797920-29800545 Lactuca sativa
Lsat_1_v5_gn_8_24121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 29797920-29798419 Lactuca sativa
Lsat_1_v5_gn_8_24121 1.0kb upstream 1.0kb upstream 3126   true Lsat_1_v8_lg_8: 29798420-29801545 Lactuca sativa
Lsat_1_v5_gn_8_24121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 29800546-29801545 Lactuca sativa
Lsat_1_v5_gn_8_24121 1.0kb downstream 1.0kb downstream 3126   true Lsat_1_v8_lg_8: 29797420-29800545 Lactuca sativa
Lsat_1_v5_gn_8_24121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 29797420-29798419 Lactuca sativa
Lsat_1_v5_gn_8_24121 2.0kb upstream 2.0kb upstream 4126   true Lsat_1_v8_lg_8: 29798420-29802545 Lactuca sativa
Lsat_1_v5_gn_8_24121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 29800546-29802545 Lactuca sativa
Lsat_1_v5_gn_8_24121 2.0kb downstream 2.0kb downstream 4126   true Lsat_1_v8_lg_8: 29796420-29800545 Lactuca sativa
Lsat_1_v5_gn_8_24121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 29796420-29798419 Lactuca sativa
Lsat_1_v5_gn_8_24121 5.0kb upstream 5.0kb upstream 7126   true Lsat_1_v8_lg_8: 29798420-29805545 Lactuca sativa
Lsat_1_v5_gn_8_24121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 29800546-29805545 Lactuca sativa
Lsat_1_v5_gn_8_24121 5.0kb downstream 5.0kb downstream 7126   true Lsat_1_v8_lg_8: 29793420-29800545 Lactuca sativa
Lsat_1_v5_gn_8_24121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 29793420-29798419 Lactuca sativa
Lsat_1_v5_gn_8_24121 10.0kb upstream 10.0kb upstream 12126   true Lsat_1_v8_lg_8: 29798420-29810545 Lactuca sativa
Lsat_1_v5_gn_8_24121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 29800546-29810545 Lactuca sativa
Lsat_1_v5_gn_8_24121 10.0kb downstream 10.0kb downstream 12126   true Lsat_1_v8_lg_8: 29788420-29800545 Lactuca sativa
Lsat_1_v5_gn_8_24121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 29788420-29798419 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478648 5263 Asterids View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain