Gene : Lsat_1_v5_gn_8_24940 L. sativa V8
Defline:  (1 of 1) PTHR12121//PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  840
Name:  ? Lsat_1_v5_gn_8_24940 Secondary Identifier:  ? PAC:38954723
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_24940 0.5kb upstream 0.5kb upstream 2657   true Lsat_1_v8_lg_8: 31819460-31822116 Lactuca sativa
Lsat_1_v5_gn_8_24940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 31821617-31822116 Lactuca sativa
Lsat_1_v5_gn_8_24940 0.5kb downstream 0.5kb downstream 2657   true Lsat_1_v8_lg_8: 31818960-31821616 Lactuca sativa
Lsat_1_v5_gn_8_24940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 31818960-31819459 Lactuca sativa
Lsat_1_v5_gn_8_24940 1.0kb upstream 1.0kb upstream 3157   true Lsat_1_v8_lg_8: 31819460-31822616 Lactuca sativa
Lsat_1_v5_gn_8_24940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 31821617-31822616 Lactuca sativa
Lsat_1_v5_gn_8_24940 1.0kb downstream 1.0kb downstream 3157   true Lsat_1_v8_lg_8: 31818460-31821616 Lactuca sativa
Lsat_1_v5_gn_8_24940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 31818460-31819459 Lactuca sativa
Lsat_1_v5_gn_8_24940 2.0kb upstream 2.0kb upstream 4157   true Lsat_1_v8_lg_8: 31819460-31823616 Lactuca sativa
Lsat_1_v5_gn_8_24940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 31821617-31823616 Lactuca sativa
Lsat_1_v5_gn_8_24940 2.0kb downstream 2.0kb downstream 4157   true Lsat_1_v8_lg_8: 31817460-31821616 Lactuca sativa
Lsat_1_v5_gn_8_24940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 31817460-31819459 Lactuca sativa
Lsat_1_v5_gn_8_24940 5.0kb upstream 5.0kb upstream 7157   true Lsat_1_v8_lg_8: 31819460-31826616 Lactuca sativa
Lsat_1_v5_gn_8_24940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 31821617-31826616 Lactuca sativa
Lsat_1_v5_gn_8_24940 5.0kb downstream 5.0kb downstream 7157   true Lsat_1_v8_lg_8: 31814460-31821616 Lactuca sativa
Lsat_1_v5_gn_8_24940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 31814460-31819459 Lactuca sativa
Lsat_1_v5_gn_8_24940 10.0kb upstream 10.0kb upstream 12157   true Lsat_1_v8_lg_8: 31819460-31831616 Lactuca sativa
Lsat_1_v5_gn_8_24940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 31821617-31831616 Lactuca sativa
Lsat_1_v5_gn_8_24940 10.0kb downstream 10.0kb downstream 12157   true Lsat_1_v8_lg_8: 31809460-31821616 Lactuca sativa
Lsat_1_v5_gn_8_24940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 31809460-31819459 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474804 5263 Asterids View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain