Gene : Lsat_1_v5_gn_8_65481 L. sativa V8
Defline:  (1 of 1) PTHR10906//PTHR10906:SF9 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  2032
Name:  ? Lsat_1_v5_gn_8_65481 Secondary Identifier:  ? PAC:38951283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_65481 0.5kb upstream 0.5kb upstream 4245   true Lsat_1_v8_lg_8: 93873787-93878031 Lactuca sativa
Lsat_1_v5_gn_8_65481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 93873787-93874286 Lactuca sativa
Lsat_1_v5_gn_8_65481 0.5kb downstream 0.5kb downstream 4245   true Lsat_1_v8_lg_8: 93874287-93878531 Lactuca sativa
Lsat_1_v5_gn_8_65481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 93878032-93878531 Lactuca sativa
Lsat_1_v5_gn_8_65481 1.0kb upstream 1.0kb upstream 4745   true Lsat_1_v8_lg_8: 93873287-93878031 Lactuca sativa
Lsat_1_v5_gn_8_65481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 93873287-93874286 Lactuca sativa
Lsat_1_v5_gn_8_65481 1.0kb downstream 1.0kb downstream 4745   true Lsat_1_v8_lg_8: 93874287-93879031 Lactuca sativa
Lsat_1_v5_gn_8_65481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 93878032-93879031 Lactuca sativa
Lsat_1_v5_gn_8_65481 2.0kb upstream 2.0kb upstream 5745   true Lsat_1_v8_lg_8: 93872287-93878031 Lactuca sativa
Lsat_1_v5_gn_8_65481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 93872287-93874286 Lactuca sativa
Lsat_1_v5_gn_8_65481 2.0kb downstream 2.0kb downstream 5745   true Lsat_1_v8_lg_8: 93874287-93880031 Lactuca sativa
Lsat_1_v5_gn_8_65481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 93878032-93880031 Lactuca sativa
Lsat_1_v5_gn_8_65481 5.0kb upstream 5.0kb upstream 8745   true Lsat_1_v8_lg_8: 93869287-93878031 Lactuca sativa
Lsat_1_v5_gn_8_65481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 93869287-93874286 Lactuca sativa
Lsat_1_v5_gn_8_65481 5.0kb downstream 5.0kb downstream 8745   true Lsat_1_v8_lg_8: 93874287-93883031 Lactuca sativa
Lsat_1_v5_gn_8_65481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 93878032-93883031 Lactuca sativa
Lsat_1_v5_gn_8_65481 10.0kb upstream 10.0kb upstream 13745   true Lsat_1_v8_lg_8: 93864287-93878031 Lactuca sativa
Lsat_1_v5_gn_8_65481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 93864287-93874286 Lactuca sativa
Lsat_1_v5_gn_8_65481 10.0kb downstream 10.0kb downstream 13745   true Lsat_1_v8_lg_8: 93874287-93888031 Lactuca sativa
Lsat_1_v5_gn_8_65481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 93878032-93888031 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470420 5263 Asterids View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain