Gene : Lsat_1_v5_gn_8_69120 L. sativa V8
Defline:  (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) Genomic Order:  2152
Name:  ? Lsat_1_v5_gn_8_69120 Secondary Identifier:  ? PAC:38952989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_69120 0.5kb upstream 0.5kb upstream 6662   true Lsat_1_v8_lg_8: 101400448-101407109 Lactuca sativa
Lsat_1_v5_gn_8_69120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 101406610-101407109 Lactuca sativa
Lsat_1_v5_gn_8_69120 0.5kb downstream 0.5kb downstream 6662   true Lsat_1_v8_lg_8: 101399948-101406609 Lactuca sativa
Lsat_1_v5_gn_8_69120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 101399948-101400447 Lactuca sativa
Lsat_1_v5_gn_8_69120 1.0kb upstream 1.0kb upstream 7162   true Lsat_1_v8_lg_8: 101400448-101407609 Lactuca sativa
Lsat_1_v5_gn_8_69120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 101406610-101407609 Lactuca sativa
Lsat_1_v5_gn_8_69120 1.0kb downstream 1.0kb downstream 7162   true Lsat_1_v8_lg_8: 101399448-101406609 Lactuca sativa
Lsat_1_v5_gn_8_69120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 101399448-101400447 Lactuca sativa
Lsat_1_v5_gn_8_69120 2.0kb upstream 2.0kb upstream 8162   true Lsat_1_v8_lg_8: 101400448-101408609 Lactuca sativa
Lsat_1_v5_gn_8_69120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 101406610-101408609 Lactuca sativa
Lsat_1_v5_gn_8_69120 2.0kb downstream 2.0kb downstream 8162   true Lsat_1_v8_lg_8: 101398448-101406609 Lactuca sativa
Lsat_1_v5_gn_8_69120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 101398448-101400447 Lactuca sativa
Lsat_1_v5_gn_8_69120 5.0kb upstream 5.0kb upstream 11162   true Lsat_1_v8_lg_8: 101400448-101411609 Lactuca sativa
Lsat_1_v5_gn_8_69120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 101406610-101411609 Lactuca sativa
Lsat_1_v5_gn_8_69120 5.0kb downstream 5.0kb downstream 11162   true Lsat_1_v8_lg_8: 101395448-101406609 Lactuca sativa
Lsat_1_v5_gn_8_69120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 101395448-101400447 Lactuca sativa
Lsat_1_v5_gn_8_69120 10.0kb upstream 10.0kb upstream 16162   true Lsat_1_v8_lg_8: 101400448-101416609 Lactuca sativa
Lsat_1_v5_gn_8_69120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 101406610-101416609 Lactuca sativa
Lsat_1_v5_gn_8_69120 10.0kb downstream 10.0kb downstream 16162   true Lsat_1_v8_lg_8: 101390448-101406609 Lactuca sativa
Lsat_1_v5_gn_8_69120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 101390448-101400447 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475974 5263 Asterids View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain