Gene : Lsat_1_v5_gn_8_76040 L. sativa V8
Defline:  (1 of 4) PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  2303
Name:  ? Lsat_1_v5_gn_8_76040 Secondary Identifier:  ? PAC:38953029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_76040 0.5kb upstream 0.5kb upstream 4256   true Lsat_1_v8_lg_8: 108788000-108792255 Lactuca sativa
Lsat_1_v5_gn_8_76040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 108788000-108788499 Lactuca sativa
Lsat_1_v5_gn_8_76040 0.5kb downstream 0.5kb downstream 4256   true Lsat_1_v8_lg_8: 108788500-108792755 Lactuca sativa
Lsat_1_v5_gn_8_76040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 108792256-108792755 Lactuca sativa
Lsat_1_v5_gn_8_76040 1.0kb upstream 1.0kb upstream 4756   true Lsat_1_v8_lg_8: 108787500-108792255 Lactuca sativa
Lsat_1_v5_gn_8_76040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 108787500-108788499 Lactuca sativa
Lsat_1_v5_gn_8_76040 1.0kb downstream 1.0kb downstream 4756   true Lsat_1_v8_lg_8: 108788500-108793255 Lactuca sativa
Lsat_1_v5_gn_8_76040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 108792256-108793255 Lactuca sativa
Lsat_1_v5_gn_8_76040 2.0kb upstream 2.0kb upstream 5756   true Lsat_1_v8_lg_8: 108786500-108792255 Lactuca sativa
Lsat_1_v5_gn_8_76040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 108786500-108788499 Lactuca sativa
Lsat_1_v5_gn_8_76040 2.0kb downstream 2.0kb downstream 5756   true Lsat_1_v8_lg_8: 108788500-108794255 Lactuca sativa
Lsat_1_v5_gn_8_76040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 108792256-108794255 Lactuca sativa
Lsat_1_v5_gn_8_76040 5.0kb upstream 5.0kb upstream 8756   true Lsat_1_v8_lg_8: 108783500-108792255 Lactuca sativa
Lsat_1_v5_gn_8_76040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 108783500-108788499 Lactuca sativa
Lsat_1_v5_gn_8_76040 5.0kb downstream 5.0kb downstream 8756   true Lsat_1_v8_lg_8: 108788500-108797255 Lactuca sativa
Lsat_1_v5_gn_8_76040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 108792256-108797255 Lactuca sativa
Lsat_1_v5_gn_8_76040 10.0kb upstream 10.0kb upstream 13756   true Lsat_1_v8_lg_8: 108778500-108792255 Lactuca sativa
Lsat_1_v5_gn_8_76040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 108778500-108788499 Lactuca sativa
Lsat_1_v5_gn_8_76040 10.0kb downstream 10.0kb downstream 13756   true Lsat_1_v8_lg_8: 108788500-108802255 Lactuca sativa
Lsat_1_v5_gn_8_76040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 108792256-108802255 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
121466522 5263 Asterids View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain