Gene : Lsat_1_v5_gn_8_77140 L. sativa V8
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  2415
Name:  ? Lsat_1_v5_gn_8_77140 Secondary Identifier:  ? PAC:38950411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa HISTSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_77140 0.5kb upstream 0.5kb upstream 3006   true Lsat_1_v8_lg_8: 113302317-113305322 Lactuca sativa
Lsat_1_v5_gn_8_77140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 113304823-113305322 Lactuca sativa
Lsat_1_v5_gn_8_77140 0.5kb downstream 0.5kb downstream 3006   true Lsat_1_v8_lg_8: 113301817-113304822 Lactuca sativa
Lsat_1_v5_gn_8_77140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 113301817-113302316 Lactuca sativa
Lsat_1_v5_gn_8_77140 1.0kb upstream 1.0kb upstream 3506   true Lsat_1_v8_lg_8: 113302317-113305822 Lactuca sativa
Lsat_1_v5_gn_8_77140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 113304823-113305822 Lactuca sativa
Lsat_1_v5_gn_8_77140 1.0kb downstream 1.0kb downstream 3506   true Lsat_1_v8_lg_8: 113301317-113304822 Lactuca sativa
Lsat_1_v5_gn_8_77140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 113301317-113302316 Lactuca sativa
Lsat_1_v5_gn_8_77140 2.0kb upstream 2.0kb upstream 4506   true Lsat_1_v8_lg_8: 113302317-113306822 Lactuca sativa
Lsat_1_v5_gn_8_77140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 113304823-113306822 Lactuca sativa
Lsat_1_v5_gn_8_77140 2.0kb downstream 2.0kb downstream 4506   true Lsat_1_v8_lg_8: 113300317-113304822 Lactuca sativa
Lsat_1_v5_gn_8_77140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 113300317-113302316 Lactuca sativa
Lsat_1_v5_gn_8_77140 5.0kb upstream 5.0kb upstream 7506   true Lsat_1_v8_lg_8: 113302317-113309822 Lactuca sativa
Lsat_1_v5_gn_8_77140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 113304823-113309822 Lactuca sativa
Lsat_1_v5_gn_8_77140 5.0kb downstream 5.0kb downstream 7506   true Lsat_1_v8_lg_8: 113297317-113304822 Lactuca sativa
Lsat_1_v5_gn_8_77140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 113297317-113302316 Lactuca sativa
Lsat_1_v5_gn_8_77140 10.0kb upstream 10.0kb upstream 12506   true Lsat_1_v8_lg_8: 113302317-113314822 Lactuca sativa
Lsat_1_v5_gn_8_77140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 113304823-113314822 Lactuca sativa
Lsat_1_v5_gn_8_77140 10.0kb downstream 10.0kb downstream 12506   true Lsat_1_v8_lg_8: 113292317-113304822 Lactuca sativa
Lsat_1_v5_gn_8_77140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 113292317-113302316 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
121468770 5263 Asterids View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain