Gene : Lsat_1_v5_gn_8_78860 L. sativa V8
Defline:  (1 of 2) K01520 - dUTP pyrophosphatase (dut, DUT) Genomic Order:  2385
Name:  ? Lsat_1_v5_gn_8_78860 Secondary Identifier:  ? PAC:38955690
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7206 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_78860 0.5kb upstream 0.5kb upstream 1676   true Lsat_1_v8_lg_8: 112655678-112657353 Lactuca sativa
Lsat_1_v5_gn_8_78860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 112655678-112656177 Lactuca sativa
Lsat_1_v5_gn_8_78860 0.5kb downstream 0.5kb downstream 1676   true Lsat_1_v8_lg_8: 112656178-112657853 Lactuca sativa
Lsat_1_v5_gn_8_78860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 112657354-112657853 Lactuca sativa
Lsat_1_v5_gn_8_78860 1.0kb upstream 1.0kb upstream 2176   true Lsat_1_v8_lg_8: 112655178-112657353 Lactuca sativa
Lsat_1_v5_gn_8_78860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 112655178-112656177 Lactuca sativa
Lsat_1_v5_gn_8_78860 1.0kb downstream 1.0kb downstream 2176   true Lsat_1_v8_lg_8: 112656178-112658353 Lactuca sativa
Lsat_1_v5_gn_8_78860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 112657354-112658353 Lactuca sativa
Lsat_1_v5_gn_8_78860 2.0kb upstream 2.0kb upstream 3176   true Lsat_1_v8_lg_8: 112654178-112657353 Lactuca sativa
Lsat_1_v5_gn_8_78860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 112654178-112656177 Lactuca sativa
Lsat_1_v5_gn_8_78860 2.0kb downstream 2.0kb downstream 3176   true Lsat_1_v8_lg_8: 112656178-112659353 Lactuca sativa
Lsat_1_v5_gn_8_78860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 112657354-112659353 Lactuca sativa
Lsat_1_v5_gn_8_78860 5.0kb upstream 5.0kb upstream 6176   true Lsat_1_v8_lg_8: 112651178-112657353 Lactuca sativa
Lsat_1_v5_gn_8_78860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 112651178-112656177 Lactuca sativa
Lsat_1_v5_gn_8_78860 5.0kb downstream 5.0kb downstream 6176   true Lsat_1_v8_lg_8: 112656178-112662353 Lactuca sativa
Lsat_1_v5_gn_8_78860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 112657354-112662353 Lactuca sativa
Lsat_1_v5_gn_8_78860 10.0kb upstream 10.0kb upstream 11176   true Lsat_1_v8_lg_8: 112646178-112657353 Lactuca sativa
Lsat_1_v5_gn_8_78860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 112646178-112656177 Lactuca sativa
Lsat_1_v5_gn_8_78860 10.0kb downstream 10.0kb downstream 11176   true Lsat_1_v8_lg_8: 112656178-112667353 Lactuca sativa
Lsat_1_v5_gn_8_78860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 112657354-112667353 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040880 5273 Angiosperm View MSA
121477824 5263 Asterids View MSA
123748196 5271 Pentapetalae View MSA
122788065 5272 Eudicot View MSA
121349726 5274 Embryophyte View MSA
123424494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain