Gene : Lsat_1_v5_gn_8_78640 L. sativa V8
Defline:  (1 of 2) K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Genomic Order:  2375
Name:  ? Lsat_1_v5_gn_8_78640 Secondary Identifier:  ? PAC:38949152
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5080 Lactuca sativa pathologic  
Lsativa PWY-6433 Lactuca sativa pathologic  
Lsativa PWY-6598 Lactuca sativa pathologic  
Lsativa PWY-7036 Lactuca sativa pathologic  
Lsativa PWY-7601 Lactuca sativa pathologic  
Lsativa PWY-7606 Lactuca sativa pathologic  
Lsativa PWY-7619 Lactuca sativa pathologic  
Lsativa PWY-7726 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_78640 0.5kb upstream 0.5kb upstream 2474   true Lsat_1_v8_lg_8: 112486863-112489336 Lactuca sativa
Lsat_1_v5_gn_8_78640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 112486863-112487362 Lactuca sativa
Lsat_1_v5_gn_8_78640 0.5kb downstream 0.5kb downstream 2474   true Lsat_1_v8_lg_8: 112487363-112489836 Lactuca sativa
Lsat_1_v5_gn_8_78640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 112489337-112489836 Lactuca sativa
Lsat_1_v5_gn_8_78640 1.0kb upstream 1.0kb upstream 2974   true Lsat_1_v8_lg_8: 112486363-112489336 Lactuca sativa
Lsat_1_v5_gn_8_78640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 112486363-112487362 Lactuca sativa
Lsat_1_v5_gn_8_78640 1.0kb downstream 1.0kb downstream 2974   true Lsat_1_v8_lg_8: 112487363-112490336 Lactuca sativa
Lsat_1_v5_gn_8_78640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 112489337-112490336 Lactuca sativa
Lsat_1_v5_gn_8_78640 2.0kb upstream 2.0kb upstream 3974   true Lsat_1_v8_lg_8: 112485363-112489336 Lactuca sativa
Lsat_1_v5_gn_8_78640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 112485363-112487362 Lactuca sativa
Lsat_1_v5_gn_8_78640 2.0kb downstream 2.0kb downstream 3974   true Lsat_1_v8_lg_8: 112487363-112491336 Lactuca sativa
Lsat_1_v5_gn_8_78640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 112489337-112491336 Lactuca sativa
Lsat_1_v5_gn_8_78640 5.0kb upstream 5.0kb upstream 6974   true Lsat_1_v8_lg_8: 112482363-112489336 Lactuca sativa
Lsat_1_v5_gn_8_78640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 112482363-112487362 Lactuca sativa
Lsat_1_v5_gn_8_78640 5.0kb downstream 5.0kb downstream 6974   true Lsat_1_v8_lg_8: 112487363-112494336 Lactuca sativa
Lsat_1_v5_gn_8_78640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 112489337-112494336 Lactuca sativa
Lsat_1_v5_gn_8_78640 10.0kb upstream 10.0kb upstream 11974   true Lsat_1_v8_lg_8: 112477363-112489336 Lactuca sativa
Lsat_1_v5_gn_8_78640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 112477363-112487362 Lactuca sativa
Lsat_1_v5_gn_8_78640 10.0kb downstream 10.0kb downstream 11974   true Lsat_1_v8_lg_8: 112487363-112499336 Lactuca sativa
Lsat_1_v5_gn_8_78640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 112489337-112499336 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474196 5263 Asterids View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain