Gene : Lsat_1_v5_gn_8_82641 L. sativa V8
Defline:  (1 of 1) K01760 - cystathionine beta-lyase (metC) Genomic Order:  2573
Name:  ? Lsat_1_v5_gn_8_82641 Secondary Identifier:  ? PAC:38949235
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6936 Lactuca sativa pathologic  
Lsativa PWY-702 Lactuca sativa pathologic  
Lsativa PWY-724 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_82641 0.5kb upstream 0.5kb upstream 3418   true Lsat_1_v8_lg_8: 118921474-118924891 Lactuca sativa
Lsat_1_v5_gn_8_82641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 118924392-118924891 Lactuca sativa
Lsat_1_v5_gn_8_82641 0.5kb downstream 0.5kb downstream 3418   true Lsat_1_v8_lg_8: 118920974-118924391 Lactuca sativa
Lsat_1_v5_gn_8_82641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 118920974-118921473 Lactuca sativa
Lsat_1_v5_gn_8_82641 1.0kb upstream 1.0kb upstream 3918   true Lsat_1_v8_lg_8: 118921474-118925391 Lactuca sativa
Lsat_1_v5_gn_8_82641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 118924392-118925391 Lactuca sativa
Lsat_1_v5_gn_8_82641 1.0kb downstream 1.0kb downstream 3918   true Lsat_1_v8_lg_8: 118920474-118924391 Lactuca sativa
Lsat_1_v5_gn_8_82641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 118920474-118921473 Lactuca sativa
Lsat_1_v5_gn_8_82641 2.0kb upstream 2.0kb upstream 4918   true Lsat_1_v8_lg_8: 118921474-118926391 Lactuca sativa
Lsat_1_v5_gn_8_82641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 118924392-118926391 Lactuca sativa
Lsat_1_v5_gn_8_82641 2.0kb downstream 2.0kb downstream 4918   true Lsat_1_v8_lg_8: 118919474-118924391 Lactuca sativa
Lsat_1_v5_gn_8_82641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 118919474-118921473 Lactuca sativa
Lsat_1_v5_gn_8_82641 5.0kb upstream 5.0kb upstream 7918   true Lsat_1_v8_lg_8: 118921474-118929391 Lactuca sativa
Lsat_1_v5_gn_8_82641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 118924392-118929391 Lactuca sativa
Lsat_1_v5_gn_8_82641 5.0kb downstream 5.0kb downstream 7918   true Lsat_1_v8_lg_8: 118916474-118924391 Lactuca sativa
Lsat_1_v5_gn_8_82641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 118916474-118921473 Lactuca sativa
Lsat_1_v5_gn_8_82641 10.0kb upstream 10.0kb upstream 12918   true Lsat_1_v8_lg_8: 118921474-118934391 Lactuca sativa
Lsat_1_v5_gn_8_82641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 118924392-118934391 Lactuca sativa
Lsat_1_v5_gn_8_82641 10.0kb downstream 10.0kb downstream 12918   true Lsat_1_v8_lg_8: 118911474-118924391 Lactuca sativa
Lsat_1_v5_gn_8_82641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 118911474-118921473 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
121473643 5263 Asterids View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain