Gene : Lsat_1_v5_gn_8_82001 L. sativa V8
Defline:  (1 of 1) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  2543
Name:  ? Lsat_1_v5_gn_8_82001 Secondary Identifier:  ? PAC:38952467
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_82001 0.5kb upstream 0.5kb upstream 7101   true Lsat_1_v8_lg_8: 118326367-118333467 Lactuca sativa
Lsat_1_v5_gn_8_82001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 118326367-118326866 Lactuca sativa
Lsat_1_v5_gn_8_82001 0.5kb downstream 0.5kb downstream 7101   true Lsat_1_v8_lg_8: 118326867-118333967 Lactuca sativa
Lsat_1_v5_gn_8_82001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 118333468-118333967 Lactuca sativa
Lsat_1_v5_gn_8_82001 1.0kb upstream 1.0kb upstream 7601   true Lsat_1_v8_lg_8: 118325867-118333467 Lactuca sativa
Lsat_1_v5_gn_8_82001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 118325867-118326866 Lactuca sativa
Lsat_1_v5_gn_8_82001 1.0kb downstream 1.0kb downstream 7601   true Lsat_1_v8_lg_8: 118326867-118334467 Lactuca sativa
Lsat_1_v5_gn_8_82001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 118333468-118334467 Lactuca sativa
Lsat_1_v5_gn_8_82001 2.0kb upstream 2.0kb upstream 8601   true Lsat_1_v8_lg_8: 118324867-118333467 Lactuca sativa
Lsat_1_v5_gn_8_82001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 118324867-118326866 Lactuca sativa
Lsat_1_v5_gn_8_82001 2.0kb downstream 2.0kb downstream 8601   true Lsat_1_v8_lg_8: 118326867-118335467 Lactuca sativa
Lsat_1_v5_gn_8_82001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 118333468-118335467 Lactuca sativa
Lsat_1_v5_gn_8_82001 5.0kb upstream 5.0kb upstream 11601   true Lsat_1_v8_lg_8: 118321867-118333467 Lactuca sativa
Lsat_1_v5_gn_8_82001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 118321867-118326866 Lactuca sativa
Lsat_1_v5_gn_8_82001 5.0kb downstream 5.0kb downstream 11601   true Lsat_1_v8_lg_8: 118326867-118338467 Lactuca sativa
Lsat_1_v5_gn_8_82001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 118333468-118338467 Lactuca sativa
Lsat_1_v5_gn_8_82001 10.0kb upstream 10.0kb upstream 16601   true Lsat_1_v8_lg_8: 118316867-118333467 Lactuca sativa
Lsat_1_v5_gn_8_82001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 118316867-118326866 Lactuca sativa
Lsat_1_v5_gn_8_82001 10.0kb downstream 10.0kb downstream 16601   true Lsat_1_v8_lg_8: 118326867-118343467 Lactuca sativa
Lsat_1_v5_gn_8_82001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 118333468-118343467 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474108 5263 Asterids View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain