Gene : Lsat_1_v5_gn_8_47381 L. sativa V8
Defline:  (1 of 2) K18211 - synaptosomal-associated protein 25 (SNAP25) Genomic Order:  1512
Name:  ? Lsat_1_v5_gn_8_47381 Secondary Identifier:  ? PAC:38954080
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_47381 0.5kb upstream 0.5kb upstream 2588   true Lsat_1_v8_lg_8: 66849673-66852260 Lactuca sativa
Lsat_1_v5_gn_8_47381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 66851761-66852260 Lactuca sativa
Lsat_1_v5_gn_8_47381 0.5kb downstream 0.5kb downstream 2588   true Lsat_1_v8_lg_8: 66849173-66851760 Lactuca sativa
Lsat_1_v5_gn_8_47381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 66849173-66849672 Lactuca sativa
Lsat_1_v5_gn_8_47381 1.0kb upstream 1.0kb upstream 3088   true Lsat_1_v8_lg_8: 66849673-66852760 Lactuca sativa
Lsat_1_v5_gn_8_47381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 66851761-66852760 Lactuca sativa
Lsat_1_v5_gn_8_47381 1.0kb downstream 1.0kb downstream 3088   true Lsat_1_v8_lg_8: 66848673-66851760 Lactuca sativa
Lsat_1_v5_gn_8_47381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 66848673-66849672 Lactuca sativa
Lsat_1_v5_gn_8_47381 2.0kb upstream 2.0kb upstream 4088   true Lsat_1_v8_lg_8: 66849673-66853760 Lactuca sativa
Lsat_1_v5_gn_8_47381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 66851761-66853760 Lactuca sativa
Lsat_1_v5_gn_8_47381 2.0kb downstream 2.0kb downstream 4088   true Lsat_1_v8_lg_8: 66847673-66851760 Lactuca sativa
Lsat_1_v5_gn_8_47381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 66847673-66849672 Lactuca sativa
Lsat_1_v5_gn_8_47381 5.0kb upstream 5.0kb upstream 7088   true Lsat_1_v8_lg_8: 66849673-66856760 Lactuca sativa
Lsat_1_v5_gn_8_47381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 66851761-66856760 Lactuca sativa
Lsat_1_v5_gn_8_47381 5.0kb downstream 5.0kb downstream 7088   true Lsat_1_v8_lg_8: 66844673-66851760 Lactuca sativa
Lsat_1_v5_gn_8_47381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 66844673-66849672 Lactuca sativa
Lsat_1_v5_gn_8_47381 10.0kb upstream 10.0kb upstream 12088   true Lsat_1_v8_lg_8: 66849673-66861760 Lactuca sativa
Lsat_1_v5_gn_8_47381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 66851761-66861760 Lactuca sativa
Lsat_1_v5_gn_8_47381 10.0kb downstream 10.0kb downstream 12088   true Lsat_1_v8_lg_8: 66839673-66851760 Lactuca sativa
Lsat_1_v5_gn_8_47381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 66839673-66849672 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479192 5263 Asterids View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain