Gene : Lsat_1_v5_gn_8_48640 L. sativa V8
Defline:  (1 of 1) PTHR31221//PTHR31221:SF22 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 3-RELATED Genomic Order:  1552
Name:  ? Lsat_1_v5_gn_8_48640 Secondary Identifier:  ? PAC:38954587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_48640 0.5kb upstream 0.5kb upstream 3898   true Lsat_1_v8_lg_8: 68182930-68186827 Lactuca sativa
Lsat_1_v5_gn_8_48640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 68182930-68183429 Lactuca sativa
Lsat_1_v5_gn_8_48640 0.5kb downstream 0.5kb downstream 3898   true Lsat_1_v8_lg_8: 68183430-68187327 Lactuca sativa
Lsat_1_v5_gn_8_48640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 68186828-68187327 Lactuca sativa
Lsat_1_v5_gn_8_48640 1.0kb upstream 1.0kb upstream 4398   true Lsat_1_v8_lg_8: 68182430-68186827 Lactuca sativa
Lsat_1_v5_gn_8_48640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 68182430-68183429 Lactuca sativa
Lsat_1_v5_gn_8_48640 1.0kb downstream 1.0kb downstream 4398   true Lsat_1_v8_lg_8: 68183430-68187827 Lactuca sativa
Lsat_1_v5_gn_8_48640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 68186828-68187827 Lactuca sativa
Lsat_1_v5_gn_8_48640 2.0kb upstream 2.0kb upstream 5398   true Lsat_1_v8_lg_8: 68181430-68186827 Lactuca sativa
Lsat_1_v5_gn_8_48640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 68181430-68183429 Lactuca sativa
Lsat_1_v5_gn_8_48640 2.0kb downstream 2.0kb downstream 5398   true Lsat_1_v8_lg_8: 68183430-68188827 Lactuca sativa
Lsat_1_v5_gn_8_48640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 68186828-68188827 Lactuca sativa
Lsat_1_v5_gn_8_48640 5.0kb upstream 5.0kb upstream 8398   true Lsat_1_v8_lg_8: 68178430-68186827 Lactuca sativa
Lsat_1_v5_gn_8_48640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 68178430-68183429 Lactuca sativa
Lsat_1_v5_gn_8_48640 5.0kb downstream 5.0kb downstream 8398   true Lsat_1_v8_lg_8: 68183430-68191827 Lactuca sativa
Lsat_1_v5_gn_8_48640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 68186828-68191827 Lactuca sativa
Lsat_1_v5_gn_8_48640 10.0kb upstream 10.0kb upstream 13398   true Lsat_1_v8_lg_8: 68173430-68186827 Lactuca sativa
Lsat_1_v5_gn_8_48640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 68173430-68183429 Lactuca sativa
Lsat_1_v5_gn_8_48640 10.0kb downstream 10.0kb downstream 13398   true Lsat_1_v8_lg_8: 68183430-68196827 Lactuca sativa
Lsat_1_v5_gn_8_48640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 68186828-68196827 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472559 5263 Asterids View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain