Gene : Lsat_1_v5_gn_8_53481 L. sativa V8
Defline:  (1 of 13) PTHR23041//PTHR23041:SF64 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE BAH1 Genomic Order:  1705
Name:  ? Lsat_1_v5_gn_8_53481 Secondary Identifier:  ? PAC:38955009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_53481 0.5kb upstream 0.5kb upstream 3719   true Lsat_1_v8_lg_8: 75633226-75636944 Lactuca sativa
Lsat_1_v5_gn_8_53481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 75633226-75633725 Lactuca sativa
Lsat_1_v5_gn_8_53481 0.5kb downstream 0.5kb downstream 3719   true Lsat_1_v8_lg_8: 75633726-75637444 Lactuca sativa
Lsat_1_v5_gn_8_53481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 75636945-75637444 Lactuca sativa
Lsat_1_v5_gn_8_53481 1.0kb upstream 1.0kb upstream 4219   true Lsat_1_v8_lg_8: 75632726-75636944 Lactuca sativa
Lsat_1_v5_gn_8_53481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 75632726-75633725 Lactuca sativa
Lsat_1_v5_gn_8_53481 1.0kb downstream 1.0kb downstream 4219   true Lsat_1_v8_lg_8: 75633726-75637944 Lactuca sativa
Lsat_1_v5_gn_8_53481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 75636945-75637944 Lactuca sativa
Lsat_1_v5_gn_8_53481 2.0kb upstream 2.0kb upstream 5219   true Lsat_1_v8_lg_8: 75631726-75636944 Lactuca sativa
Lsat_1_v5_gn_8_53481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 75631726-75633725 Lactuca sativa
Lsat_1_v5_gn_8_53481 2.0kb downstream 2.0kb downstream 5219   true Lsat_1_v8_lg_8: 75633726-75638944 Lactuca sativa
Lsat_1_v5_gn_8_53481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 75636945-75638944 Lactuca sativa
Lsat_1_v5_gn_8_53481 5.0kb upstream 5.0kb upstream 8219   true Lsat_1_v8_lg_8: 75628726-75636944 Lactuca sativa
Lsat_1_v5_gn_8_53481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 75628726-75633725 Lactuca sativa
Lsat_1_v5_gn_8_53481 5.0kb downstream 5.0kb downstream 8219   true Lsat_1_v8_lg_8: 75633726-75641944 Lactuca sativa
Lsat_1_v5_gn_8_53481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 75636945-75641944 Lactuca sativa
Lsat_1_v5_gn_8_53481 10.0kb upstream 10.0kb upstream 13219   true Lsat_1_v8_lg_8: 75623726-75636944 Lactuca sativa
Lsat_1_v5_gn_8_53481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 75623726-75633725 Lactuca sativa
Lsat_1_v5_gn_8_53481 10.0kb downstream 10.0kb downstream 13219   true Lsat_1_v8_lg_8: 75633726-75646944 Lactuca sativa
Lsat_1_v5_gn_8_53481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 75636945-75646944 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473710 5263 Asterids View MSA
123751334 5271 Pentapetalae View MSA
122791887 5272 Eudicot View MSA
122042186 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain