Gene : Lsat_1_v5_gn_0_5341 L. sativa V8
Defline:  (1 of 1) K11836 - ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] (USP5_13, UBP14) Genomic Order:  3010
Name:  ? Lsat_1_v5_gn_0_5341 Secondary Identifier:  ? PAC:38926957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_5341 0.5kb upstream 0.5kb upstream 6783   true Lsat_1_v8_lg_9: 150694885-150701667 Lactuca sativa
Lsat_1_v5_gn_0_5341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 150694885-150695384 Lactuca sativa
Lsat_1_v5_gn_0_5341 0.5kb downstream 0.5kb downstream 6783   true Lsat_1_v8_lg_9: 150695385-150702167 Lactuca sativa
Lsat_1_v5_gn_0_5341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 150701668-150702167 Lactuca sativa
Lsat_1_v5_gn_0_5341 1.0kb upstream 1.0kb upstream 7283   true Lsat_1_v8_lg_9: 150694385-150701667 Lactuca sativa
Lsat_1_v5_gn_0_5341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 150694385-150695384 Lactuca sativa
Lsat_1_v5_gn_0_5341 1.0kb downstream 1.0kb downstream 7283   true Lsat_1_v8_lg_9: 150695385-150702667 Lactuca sativa
Lsat_1_v5_gn_0_5341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 150701668-150702667 Lactuca sativa
Lsat_1_v5_gn_0_5341 2.0kb upstream 2.0kb upstream 8283   true Lsat_1_v8_lg_9: 150693385-150701667 Lactuca sativa
Lsat_1_v5_gn_0_5341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 150693385-150695384 Lactuca sativa
Lsat_1_v5_gn_0_5341 2.0kb downstream 2.0kb downstream 8283   true Lsat_1_v8_lg_9: 150695385-150703667 Lactuca sativa
Lsat_1_v5_gn_0_5341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 150701668-150703667 Lactuca sativa
Lsat_1_v5_gn_0_5341 5.0kb upstream 5.0kb upstream 11283   true Lsat_1_v8_lg_9: 150690385-150701667 Lactuca sativa
Lsat_1_v5_gn_0_5341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 150690385-150695384 Lactuca sativa
Lsat_1_v5_gn_0_5341 5.0kb downstream 5.0kb downstream 11283   true Lsat_1_v8_lg_9: 150695385-150706667 Lactuca sativa
Lsat_1_v5_gn_0_5341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 150701668-150706667 Lactuca sativa
Lsat_1_v5_gn_0_5341 10.0kb upstream 10.0kb upstream 16283   true Lsat_1_v8_lg_9: 150685385-150701667 Lactuca sativa
Lsat_1_v5_gn_0_5341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 150685385-150695384 Lactuca sativa
Lsat_1_v5_gn_0_5341 10.0kb downstream 10.0kb downstream 16283   true Lsat_1_v8_lg_9: 150695385-150711667 Lactuca sativa
Lsat_1_v5_gn_0_5341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 150701668-150711667 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469481 5263 Asterids View MSA
123745589 5271 Pentapetalae View MSA
122786484 5272 Eudicot View MSA
122048085 5273 Angiosperm View MSA
121345286 5274 Embryophyte View MSA
123424236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain