Gene : Lsat_1_v5_gn_0_6780 L. sativa V8
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2948
Name:  ? Lsat_1_v5_gn_0_6780 Secondary Identifier:  ? PAC:38927928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_6780 0.5kb upstream 0.5kb upstream 4042   true Lsat_1_v8_lg_9: 147167735-147171776 Lactuca sativa
Lsat_1_v5_gn_0_6780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 147167735-147168234 Lactuca sativa
Lsat_1_v5_gn_0_6780 0.5kb downstream 0.5kb downstream 4042   true Lsat_1_v8_lg_9: 147168235-147172276 Lactuca sativa
Lsat_1_v5_gn_0_6780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 147171777-147172276 Lactuca sativa
Lsat_1_v5_gn_0_6780 1.0kb upstream 1.0kb upstream 4542   true Lsat_1_v8_lg_9: 147167235-147171776 Lactuca sativa
Lsat_1_v5_gn_0_6780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 147167235-147168234 Lactuca sativa
Lsat_1_v5_gn_0_6780 1.0kb downstream 1.0kb downstream 4542   true Lsat_1_v8_lg_9: 147168235-147172776 Lactuca sativa
Lsat_1_v5_gn_0_6780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 147171777-147172776 Lactuca sativa
Lsat_1_v5_gn_0_6780 2.0kb upstream 2.0kb upstream 5542   true Lsat_1_v8_lg_9: 147166235-147171776 Lactuca sativa
Lsat_1_v5_gn_0_6780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 147166235-147168234 Lactuca sativa
Lsat_1_v5_gn_0_6780 2.0kb downstream 2.0kb downstream 5542   true Lsat_1_v8_lg_9: 147168235-147173776 Lactuca sativa
Lsat_1_v5_gn_0_6780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 147171777-147173776 Lactuca sativa
Lsat_1_v5_gn_0_6780 5.0kb upstream 5.0kb upstream 8542   true Lsat_1_v8_lg_9: 147163235-147171776 Lactuca sativa
Lsat_1_v5_gn_0_6780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 147163235-147168234 Lactuca sativa
Lsat_1_v5_gn_0_6780 5.0kb downstream 5.0kb downstream 8542   true Lsat_1_v8_lg_9: 147168235-147176776 Lactuca sativa
Lsat_1_v5_gn_0_6780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 147171777-147176776 Lactuca sativa
Lsat_1_v5_gn_0_6780 10.0kb upstream 10.0kb upstream 13542   true Lsat_1_v8_lg_9: 147158235-147171776 Lactuca sativa
Lsat_1_v5_gn_0_6780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 147158235-147168234 Lactuca sativa
Lsat_1_v5_gn_0_6780 10.0kb downstream 10.0kb downstream 13542   true Lsat_1_v8_lg_9: 147168235-147181776 Lactuca sativa
Lsat_1_v5_gn_0_6780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 147171777-147181776 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478882 5263 Asterids View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain