Gene : Lsat_1_v5_gn_9_100061 L. sativa V8
Defline:  (1 of 1) PTHR31165//PTHR31165:SF9 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Genomic Order:  3149
Name:  ? Lsat_1_v5_gn_9_100061 Secondary Identifier:  ? PAC:38927369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_100061 0.5kb upstream 0.5kb upstream 1982   true Lsat_1_v8_lg_9: 159429540-159431521 Lactuca sativa
Lsat_1_v5_gn_9_100061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 159429540-159430039 Lactuca sativa
Lsat_1_v5_gn_9_100061 0.5kb downstream 0.5kb downstream 1982   true Lsat_1_v8_lg_9: 159430040-159432021 Lactuca sativa
Lsat_1_v5_gn_9_100061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 159431522-159432021 Lactuca sativa
Lsat_1_v5_gn_9_100061 1.0kb upstream 1.0kb upstream 2482   true Lsat_1_v8_lg_9: 159429040-159431521 Lactuca sativa
Lsat_1_v5_gn_9_100061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 159429040-159430039 Lactuca sativa
Lsat_1_v5_gn_9_100061 1.0kb downstream 1.0kb downstream 2482   true Lsat_1_v8_lg_9: 159430040-159432521 Lactuca sativa
Lsat_1_v5_gn_9_100061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 159431522-159432521 Lactuca sativa
Lsat_1_v5_gn_9_100061 2.0kb upstream 2.0kb upstream 3482   true Lsat_1_v8_lg_9: 159428040-159431521 Lactuca sativa
Lsat_1_v5_gn_9_100061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 159428040-159430039 Lactuca sativa
Lsat_1_v5_gn_9_100061 2.0kb downstream 2.0kb downstream 3482   true Lsat_1_v8_lg_9: 159430040-159433521 Lactuca sativa
Lsat_1_v5_gn_9_100061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 159431522-159433521 Lactuca sativa
Lsat_1_v5_gn_9_100061 5.0kb upstream 5.0kb upstream 6482   true Lsat_1_v8_lg_9: 159425040-159431521 Lactuca sativa
Lsat_1_v5_gn_9_100061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 159425040-159430039 Lactuca sativa
Lsat_1_v5_gn_9_100061 5.0kb downstream 5.0kb downstream 6482   true Lsat_1_v8_lg_9: 159430040-159436521 Lactuca sativa
Lsat_1_v5_gn_9_100061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 159431522-159436521 Lactuca sativa
Lsat_1_v5_gn_9_100061 10.0kb upstream 10.0kb upstream 11482   true Lsat_1_v8_lg_9: 159420040-159431521 Lactuca sativa
Lsat_1_v5_gn_9_100061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 159420040-159430039 Lactuca sativa
Lsat_1_v5_gn_9_100061 10.0kb downstream 10.0kb downstream 11482   true Lsat_1_v8_lg_9: 159430040-159441521 Lactuca sativa
Lsat_1_v5_gn_9_100061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 159431522-159441521 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
121478112 5263 Asterids View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain