Gene : Lsat_1_v5_gn_9_100260 L. sativa V8
Defline:  (1 of 1) K03846 - alpha-1,2-mannosyltransferase (ALG9) Genomic Order:  3144
Name:  ? Lsat_1_v5_gn_9_100260 Secondary Identifier:  ? PAC:38922435
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_100260 0.5kb upstream 0.5kb upstream 4310   true Lsat_1_v8_lg_9: 158849789-158854098 Lactuca sativa
Lsat_1_v5_gn_9_100260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 158853599-158854098 Lactuca sativa
Lsat_1_v5_gn_9_100260 0.5kb downstream 0.5kb downstream 4310   true Lsat_1_v8_lg_9: 158849289-158853598 Lactuca sativa
Lsat_1_v5_gn_9_100260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 158849289-158849788 Lactuca sativa
Lsat_1_v5_gn_9_100260 1.0kb upstream 1.0kb upstream 4810   true Lsat_1_v8_lg_9: 158849789-158854598 Lactuca sativa
Lsat_1_v5_gn_9_100260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 158853599-158854598 Lactuca sativa
Lsat_1_v5_gn_9_100260 1.0kb downstream 1.0kb downstream 4810   true Lsat_1_v8_lg_9: 158848789-158853598 Lactuca sativa
Lsat_1_v5_gn_9_100260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 158848789-158849788 Lactuca sativa
Lsat_1_v5_gn_9_100260 2.0kb upstream 2.0kb upstream 5810   true Lsat_1_v8_lg_9: 158849789-158855598 Lactuca sativa
Lsat_1_v5_gn_9_100260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 158853599-158855598 Lactuca sativa
Lsat_1_v5_gn_9_100260 2.0kb downstream 2.0kb downstream 5810   true Lsat_1_v8_lg_9: 158847789-158853598 Lactuca sativa
Lsat_1_v5_gn_9_100260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 158847789-158849788 Lactuca sativa
Lsat_1_v5_gn_9_100260 5.0kb upstream 5.0kb upstream 8810   true Lsat_1_v8_lg_9: 158849789-158858598 Lactuca sativa
Lsat_1_v5_gn_9_100260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 158853599-158858598 Lactuca sativa
Lsat_1_v5_gn_9_100260 5.0kb downstream 5.0kb downstream 8810   true Lsat_1_v8_lg_9: 158844789-158853598 Lactuca sativa
Lsat_1_v5_gn_9_100260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 158844789-158849788 Lactuca sativa
Lsat_1_v5_gn_9_100260 10.0kb upstream 10.0kb upstream 13810   true Lsat_1_v8_lg_9: 158849789-158863598 Lactuca sativa
Lsat_1_v5_gn_9_100260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 158853599-158863598 Lactuca sativa
Lsat_1_v5_gn_9_100260 10.0kb downstream 10.0kb downstream 13810   true Lsat_1_v8_lg_9: 158839789-158853598 Lactuca sativa
Lsat_1_v5_gn_9_100260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 158839789-158849788 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470179 5263 Asterids View MSA
123739180 5271 Pentapetalae View MSA
122792899 5272 Eudicot View MSA
122047360 5273 Angiosperm View MSA
121346060 5274 Embryophyte View MSA
123423967 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain