Gene : Lsat_1_v5_gn_9_104780 L. sativa V8
Defline:  (1 of 1) PTHR21649//PTHR21649:SF26//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3284
Name:  ? Lsat_1_v5_gn_9_104780 Secondary Identifier:  ? PAC:38923996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_104780 0.5kb upstream 0.5kb upstream 1457   true Lsat_1_v8_lg_9: 168224736-168226192 Lactuca sativa
Lsat_1_v5_gn_9_104780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 168224736-168225235 Lactuca sativa
Lsat_1_v5_gn_9_104780 0.5kb downstream 0.5kb downstream 1457   true Lsat_1_v8_lg_9: 168225236-168226692 Lactuca sativa
Lsat_1_v5_gn_9_104780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 168226193-168226692 Lactuca sativa
Lsat_1_v5_gn_9_104780 1.0kb upstream 1.0kb upstream 1957   true Lsat_1_v8_lg_9: 168224236-168226192 Lactuca sativa
Lsat_1_v5_gn_9_104780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 168224236-168225235 Lactuca sativa
Lsat_1_v5_gn_9_104780 1.0kb downstream 1.0kb downstream 1957   true Lsat_1_v8_lg_9: 168225236-168227192 Lactuca sativa
Lsat_1_v5_gn_9_104780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 168226193-168227192 Lactuca sativa
Lsat_1_v5_gn_9_104780 2.0kb upstream 2.0kb upstream 2957   true Lsat_1_v8_lg_9: 168223236-168226192 Lactuca sativa
Lsat_1_v5_gn_9_104780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 168223236-168225235 Lactuca sativa
Lsat_1_v5_gn_9_104780 2.0kb downstream 2.0kb downstream 2957   true Lsat_1_v8_lg_9: 168225236-168228192 Lactuca sativa
Lsat_1_v5_gn_9_104780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 168226193-168228192 Lactuca sativa
Lsat_1_v5_gn_9_104780 5.0kb upstream 5.0kb upstream 5957   true Lsat_1_v8_lg_9: 168220236-168226192 Lactuca sativa
Lsat_1_v5_gn_9_104780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 168220236-168225235 Lactuca sativa
Lsat_1_v5_gn_9_104780 5.0kb downstream 5.0kb downstream 5957   true Lsat_1_v8_lg_9: 168225236-168231192 Lactuca sativa
Lsat_1_v5_gn_9_104780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 168226193-168231192 Lactuca sativa
Lsat_1_v5_gn_9_104780 10.0kb upstream 10.0kb upstream 10957   true Lsat_1_v8_lg_9: 168215236-168226192 Lactuca sativa
Lsat_1_v5_gn_9_104780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 168215236-168225235 Lactuca sativa
Lsat_1_v5_gn_9_104780 10.0kb downstream 10.0kb downstream 10957   true Lsat_1_v8_lg_9: 168225236-168236192 Lactuca sativa
Lsat_1_v5_gn_9_104780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 168226193-168236192 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
121473987 5263 Asterids View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain