Gene : Lsat_1_v5_gn_9_104581 L. sativa V8
Defline:  (1 of 3) K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Genomic Order:  3278
Name:  ? Lsat_1_v5_gn_9_104581 Secondary Identifier:  ? PAC:38924731
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_104581 0.5kb upstream 0.5kb upstream 5371   true Lsat_1_v8_lg_9: 168045994-168051364 Lactuca sativa
Lsat_1_v5_gn_9_104581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 168050865-168051364 Lactuca sativa
Lsat_1_v5_gn_9_104581 0.5kb downstream 0.5kb downstream 5371   true Lsat_1_v8_lg_9: 168045494-168050864 Lactuca sativa
Lsat_1_v5_gn_9_104581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 168045494-168045993 Lactuca sativa
Lsat_1_v5_gn_9_104581 1.0kb upstream 1.0kb upstream 5871   true Lsat_1_v8_lg_9: 168045994-168051864 Lactuca sativa
Lsat_1_v5_gn_9_104581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 168050865-168051864 Lactuca sativa
Lsat_1_v5_gn_9_104581 1.0kb downstream 1.0kb downstream 5871   true Lsat_1_v8_lg_9: 168044994-168050864 Lactuca sativa
Lsat_1_v5_gn_9_104581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 168044994-168045993 Lactuca sativa
Lsat_1_v5_gn_9_104581 2.0kb upstream 2.0kb upstream 6871   true Lsat_1_v8_lg_9: 168045994-168052864 Lactuca sativa
Lsat_1_v5_gn_9_104581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 168050865-168052864 Lactuca sativa
Lsat_1_v5_gn_9_104581 2.0kb downstream 2.0kb downstream 6871   true Lsat_1_v8_lg_9: 168043994-168050864 Lactuca sativa
Lsat_1_v5_gn_9_104581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 168043994-168045993 Lactuca sativa
Lsat_1_v5_gn_9_104581 5.0kb upstream 5.0kb upstream 9871   true Lsat_1_v8_lg_9: 168045994-168055864 Lactuca sativa
Lsat_1_v5_gn_9_104581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 168050865-168055864 Lactuca sativa
Lsat_1_v5_gn_9_104581 5.0kb downstream 5.0kb downstream 9871   true Lsat_1_v8_lg_9: 168040994-168050864 Lactuca sativa
Lsat_1_v5_gn_9_104581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 168040994-168045993 Lactuca sativa
Lsat_1_v5_gn_9_104581 10.0kb upstream 10.0kb upstream 14871   true Lsat_1_v8_lg_9: 168045994-168060864 Lactuca sativa
Lsat_1_v5_gn_9_104581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 168050865-168060864 Lactuca sativa
Lsat_1_v5_gn_9_104581 10.0kb downstream 10.0kb downstream 14871   true Lsat_1_v8_lg_9: 168035994-168050864 Lactuca sativa
Lsat_1_v5_gn_9_104581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 168035994-168045993 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467898 5263 Asterids View MSA
123737244 5271 Pentapetalae View MSA
122790362 5272 Eudicot View MSA
122044795 5273 Angiosperm View MSA
121310342 5274 Embryophyte View MSA
123428204 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain