Gene : Lsat_1_v5_gn_9_104040 L. sativa V8
Defline:  (1 of 4) PTHR17985//PTHR17985:SF13 - SER/THR-RICH PROTEIN T10 IN DGCR REGION // SUBFAMILY NOT NAMED Genomic Order:  3276
Name:  ? Lsat_1_v5_gn_9_104040 Secondary Identifier:  ? PAC:38922168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_104040 0.5kb upstream 0.5kb upstream 2893   true Lsat_1_v8_lg_9: 167972967-167975859 Lactuca sativa
Lsat_1_v5_gn_9_104040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 167975360-167975859 Lactuca sativa
Lsat_1_v5_gn_9_104040 0.5kb downstream 0.5kb downstream 2893   true Lsat_1_v8_lg_9: 167972467-167975359 Lactuca sativa
Lsat_1_v5_gn_9_104040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 167972467-167972966 Lactuca sativa
Lsat_1_v5_gn_9_104040 1.0kb upstream 1.0kb upstream 3393   true Lsat_1_v8_lg_9: 167972967-167976359 Lactuca sativa
Lsat_1_v5_gn_9_104040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 167975360-167976359 Lactuca sativa
Lsat_1_v5_gn_9_104040 1.0kb downstream 1.0kb downstream 3393   true Lsat_1_v8_lg_9: 167971967-167975359 Lactuca sativa
Lsat_1_v5_gn_9_104040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 167971967-167972966 Lactuca sativa
Lsat_1_v5_gn_9_104040 2.0kb upstream 2.0kb upstream 4393   true Lsat_1_v8_lg_9: 167972967-167977359 Lactuca sativa
Lsat_1_v5_gn_9_104040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 167975360-167977359 Lactuca sativa
Lsat_1_v5_gn_9_104040 2.0kb downstream 2.0kb downstream 4393   true Lsat_1_v8_lg_9: 167970967-167975359 Lactuca sativa
Lsat_1_v5_gn_9_104040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 167970967-167972966 Lactuca sativa
Lsat_1_v5_gn_9_104040 5.0kb upstream 5.0kb upstream 7393   true Lsat_1_v8_lg_9: 167972967-167980359 Lactuca sativa
Lsat_1_v5_gn_9_104040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 167975360-167980359 Lactuca sativa
Lsat_1_v5_gn_9_104040 5.0kb downstream 5.0kb downstream 7393   true Lsat_1_v8_lg_9: 167967967-167975359 Lactuca sativa
Lsat_1_v5_gn_9_104040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 167967967-167972966 Lactuca sativa
Lsat_1_v5_gn_9_104040 10.0kb upstream 10.0kb upstream 12393   true Lsat_1_v8_lg_9: 167972967-167985359 Lactuca sativa
Lsat_1_v5_gn_9_104040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 167975360-167985359 Lactuca sativa
Lsat_1_v5_gn_9_104040 10.0kb downstream 10.0kb downstream 12393   true Lsat_1_v8_lg_9: 167962967-167975359 Lactuca sativa
Lsat_1_v5_gn_9_104040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 167962967-167972966 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472161 5263 Asterids View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain