Gene : Lsat_1_v5_gn_9_106160 L. sativa V8
Defline:  (1 of 3) PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Genomic Order:  3322
Name:  ? Lsat_1_v5_gn_9_106160 Secondary Identifier:  ? PAC:38922396
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_106160 0.5kb upstream 0.5kb upstream 4737   true Lsat_1_v8_lg_9: 171430736-171435472 Lactuca sativa
Lsat_1_v5_gn_9_106160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 171434973-171435472 Lactuca sativa
Lsat_1_v5_gn_9_106160 0.5kb downstream 0.5kb downstream 4737   true Lsat_1_v8_lg_9: 171430236-171434972 Lactuca sativa
Lsat_1_v5_gn_9_106160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 171430236-171430735 Lactuca sativa
Lsat_1_v5_gn_9_106160 1.0kb upstream 1.0kb upstream 5237   true Lsat_1_v8_lg_9: 171430736-171435972 Lactuca sativa
Lsat_1_v5_gn_9_106160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 171434973-171435972 Lactuca sativa
Lsat_1_v5_gn_9_106160 1.0kb downstream 1.0kb downstream 5237   true Lsat_1_v8_lg_9: 171429736-171434972 Lactuca sativa
Lsat_1_v5_gn_9_106160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 171429736-171430735 Lactuca sativa
Lsat_1_v5_gn_9_106160 2.0kb upstream 2.0kb upstream 6237   true Lsat_1_v8_lg_9: 171430736-171436972 Lactuca sativa
Lsat_1_v5_gn_9_106160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 171434973-171436972 Lactuca sativa
Lsat_1_v5_gn_9_106160 2.0kb downstream 2.0kb downstream 6237   true Lsat_1_v8_lg_9: 171428736-171434972 Lactuca sativa
Lsat_1_v5_gn_9_106160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 171428736-171430735 Lactuca sativa
Lsat_1_v5_gn_9_106160 5.0kb upstream 5.0kb upstream 9237   true Lsat_1_v8_lg_9: 171430736-171439972 Lactuca sativa
Lsat_1_v5_gn_9_106160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 171434973-171439972 Lactuca sativa
Lsat_1_v5_gn_9_106160 5.0kb downstream 5.0kb downstream 9237   true Lsat_1_v8_lg_9: 171425736-171434972 Lactuca sativa
Lsat_1_v5_gn_9_106160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 171425736-171430735 Lactuca sativa
Lsat_1_v5_gn_9_106160 10.0kb upstream 10.0kb upstream 14237   true Lsat_1_v8_lg_9: 171430736-171444972 Lactuca sativa
Lsat_1_v5_gn_9_106160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 171434973-171444972 Lactuca sativa
Lsat_1_v5_gn_9_106160 10.0kb downstream 10.0kb downstream 14237   true Lsat_1_v8_lg_9: 171420736-171434972 Lactuca sativa
Lsat_1_v5_gn_9_106160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 171420736-171430735 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474234 5263 Asterids View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain