Gene : Lsat_1_v5_gn_9_108200 L. sativa V8
Defline:  (1 of 2) K13998 - dihydrofolate reductase / thymidylate synthase (DHFR-TS) Genomic Order:  3398
Name:  ? Lsat_1_v5_gn_9_108200 Secondary Identifier:  ? PAC:38925670
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3841 Lactuca sativa pathologic  
Lsativa PWY-6612 Lactuca sativa pathologic  
Lsativa PWY-6614 Lactuca sativa pathologic  
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7199 Lactuca sativa pathologic  
Lsativa PWY-7200 Lactuca sativa pathologic  
Lsativa PWY-7210 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_108200 0.5kb upstream 0.5kb upstream 5719   true Lsat_1_v8_lg_9: 175537089-175542807 Lactuca sativa
Lsat_1_v5_gn_9_108200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 175537089-175537588 Lactuca sativa
Lsat_1_v5_gn_9_108200 0.5kb downstream 0.5kb downstream 5719   true Lsat_1_v8_lg_9: 175537589-175543307 Lactuca sativa
Lsat_1_v5_gn_9_108200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 175542808-175543307 Lactuca sativa
Lsat_1_v5_gn_9_108200 1.0kb upstream 1.0kb upstream 6219   true Lsat_1_v8_lg_9: 175536589-175542807 Lactuca sativa
Lsat_1_v5_gn_9_108200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 175536589-175537588 Lactuca sativa
Lsat_1_v5_gn_9_108200 1.0kb downstream 1.0kb downstream 6219   true Lsat_1_v8_lg_9: 175537589-175543807 Lactuca sativa
Lsat_1_v5_gn_9_108200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 175542808-175543807 Lactuca sativa
Lsat_1_v5_gn_9_108200 2.0kb upstream 2.0kb upstream 7219   true Lsat_1_v8_lg_9: 175535589-175542807 Lactuca sativa
Lsat_1_v5_gn_9_108200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 175535589-175537588 Lactuca sativa
Lsat_1_v5_gn_9_108200 2.0kb downstream 2.0kb downstream 7219   true Lsat_1_v8_lg_9: 175537589-175544807 Lactuca sativa
Lsat_1_v5_gn_9_108200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 175542808-175544807 Lactuca sativa
Lsat_1_v5_gn_9_108200 5.0kb upstream 5.0kb upstream 10219   true Lsat_1_v8_lg_9: 175532589-175542807 Lactuca sativa
Lsat_1_v5_gn_9_108200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 175532589-175537588 Lactuca sativa
Lsat_1_v5_gn_9_108200 5.0kb downstream 5.0kb downstream 10219   true Lsat_1_v8_lg_9: 175537589-175547807 Lactuca sativa
Lsat_1_v5_gn_9_108200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 175542808-175547807 Lactuca sativa
Lsat_1_v5_gn_9_108200 10.0kb upstream 10.0kb upstream 15219   true Lsat_1_v8_lg_9: 175527589-175542807 Lactuca sativa
Lsat_1_v5_gn_9_108200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 175527589-175537588 Lactuca sativa
Lsat_1_v5_gn_9_108200 10.0kb downstream 10.0kb downstream 15219   true Lsat_1_v8_lg_9: 175537589-175552807 Lactuca sativa
Lsat_1_v5_gn_9_108200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 175542808-175552807 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475112 5263 Asterids View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain