Gene : Lsat_1_v5_gn_9_109341 L. sativa V8
Defline:  (1 of 3) PTHR12300//PTHR12300:SF60 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  3425
Name:  ? Lsat_1_v5_gn_9_109341 Secondary Identifier:  ? PAC:38923792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_109341 0.5kb upstream 0.5kb upstream 2705   true Lsat_1_v8_lg_9: 177224604-177227308 Lactuca sativa
Lsat_1_v5_gn_9_109341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 177224604-177225103 Lactuca sativa
Lsat_1_v5_gn_9_109341 0.5kb downstream 0.5kb downstream 2705   true Lsat_1_v8_lg_9: 177225104-177227808 Lactuca sativa
Lsat_1_v5_gn_9_109341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 177227309-177227808 Lactuca sativa
Lsat_1_v5_gn_9_109341 1.0kb upstream 1.0kb upstream 3205   true Lsat_1_v8_lg_9: 177224104-177227308 Lactuca sativa
Lsat_1_v5_gn_9_109341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 177224104-177225103 Lactuca sativa
Lsat_1_v5_gn_9_109341 1.0kb downstream 1.0kb downstream 3205   true Lsat_1_v8_lg_9: 177225104-177228308 Lactuca sativa
Lsat_1_v5_gn_9_109341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 177227309-177228308 Lactuca sativa
Lsat_1_v5_gn_9_109341 2.0kb upstream 2.0kb upstream 4205   true Lsat_1_v8_lg_9: 177223104-177227308 Lactuca sativa
Lsat_1_v5_gn_9_109341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 177223104-177225103 Lactuca sativa
Lsat_1_v5_gn_9_109341 2.0kb downstream 2.0kb downstream 4205   true Lsat_1_v8_lg_9: 177225104-177229308 Lactuca sativa
Lsat_1_v5_gn_9_109341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 177227309-177229308 Lactuca sativa
Lsat_1_v5_gn_9_109341 5.0kb upstream 5.0kb upstream 7205   true Lsat_1_v8_lg_9: 177220104-177227308 Lactuca sativa
Lsat_1_v5_gn_9_109341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 177220104-177225103 Lactuca sativa
Lsat_1_v5_gn_9_109341 5.0kb downstream 5.0kb downstream 7205   true Lsat_1_v8_lg_9: 177225104-177232308 Lactuca sativa
Lsat_1_v5_gn_9_109341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 177227309-177232308 Lactuca sativa
Lsat_1_v5_gn_9_109341 10.0kb upstream 10.0kb upstream 12205   true Lsat_1_v8_lg_9: 177215104-177227308 Lactuca sativa
Lsat_1_v5_gn_9_109341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 177215104-177225103 Lactuca sativa
Lsat_1_v5_gn_9_109341 10.0kb downstream 10.0kb downstream 12205   true Lsat_1_v8_lg_9: 177225104-177237308 Lactuca sativa
Lsat_1_v5_gn_9_109341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 177227309-177237308 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481368 5263 Asterids View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain