Gene : Lsat_1_v5_gn_9_110320 L. sativa V8
Defline:  (1 of 2) PTHR22792//PTHR22792:SF62 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6C Genomic Order:  3445
Name:  ? Lsat_1_v5_gn_9_110320 Secondary Identifier:  ? PAC:38924130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_110320 0.5kb upstream 0.5kb upstream 2935   true Lsat_1_v8_lg_9: 177942325-177945259 Lactuca sativa
Lsat_1_v5_gn_9_110320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 177942325-177942824 Lactuca sativa
Lsat_1_v5_gn_9_110320 0.5kb downstream 0.5kb downstream 2935   true Lsat_1_v8_lg_9: 177942825-177945759 Lactuca sativa
Lsat_1_v5_gn_9_110320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 177945260-177945759 Lactuca sativa
Lsat_1_v5_gn_9_110320 1.0kb upstream 1.0kb upstream 3435   true Lsat_1_v8_lg_9: 177941825-177945259 Lactuca sativa
Lsat_1_v5_gn_9_110320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 177941825-177942824 Lactuca sativa
Lsat_1_v5_gn_9_110320 1.0kb downstream 1.0kb downstream 3435   true Lsat_1_v8_lg_9: 177942825-177946259 Lactuca sativa
Lsat_1_v5_gn_9_110320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 177945260-177946259 Lactuca sativa
Lsat_1_v5_gn_9_110320 2.0kb upstream 2.0kb upstream 4435   true Lsat_1_v8_lg_9: 177940825-177945259 Lactuca sativa
Lsat_1_v5_gn_9_110320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 177940825-177942824 Lactuca sativa
Lsat_1_v5_gn_9_110320 2.0kb downstream 2.0kb downstream 4435   true Lsat_1_v8_lg_9: 177942825-177947259 Lactuca sativa
Lsat_1_v5_gn_9_110320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 177945260-177947259 Lactuca sativa
Lsat_1_v5_gn_9_110320 5.0kb upstream 5.0kb upstream 7435   true Lsat_1_v8_lg_9: 177937825-177945259 Lactuca sativa
Lsat_1_v5_gn_9_110320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 177937825-177942824 Lactuca sativa
Lsat_1_v5_gn_9_110320 5.0kb downstream 5.0kb downstream 7435   true Lsat_1_v8_lg_9: 177942825-177950259 Lactuca sativa
Lsat_1_v5_gn_9_110320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 177945260-177950259 Lactuca sativa
Lsat_1_v5_gn_9_110320 10.0kb upstream 10.0kb upstream 12435   true Lsat_1_v8_lg_9: 177932825-177945259 Lactuca sativa
Lsat_1_v5_gn_9_110320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 177932825-177942824 Lactuca sativa
Lsat_1_v5_gn_9_110320 10.0kb downstream 10.0kb downstream 12435   true Lsat_1_v8_lg_9: 177942825-177955259 Lactuca sativa
Lsat_1_v5_gn_9_110320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 177945260-177955259 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474511 5263 Asterids View MSA
123749419 5271 Pentapetalae View MSA
122785801 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain