Gene : Lsat_1_v5_gn_8_83900 L. sativa V8
Defline:  (1 of 1) PTHR32518:SF3 - 4-ALPHA-GLUCANOTRANSFERASE DPE2 Genomic Order:  2639
Name:  ? Lsat_1_v5_gn_8_83900 Secondary Identifier:  ? PAC:38955148
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5941 Lactuca sativa pathologic  
Lsativa PWY-6724 Lactuca sativa pathologic  
Lsativa PWY-7238 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_83900 0.5kb upstream 0.5kb upstream 6441   true Lsat_1_v8_lg_8: 122544324-122550764 Lactuca sativa
Lsat_1_v5_gn_8_83900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 122550265-122550764 Lactuca sativa
Lsat_1_v5_gn_8_83900 0.5kb downstream 0.5kb downstream 6441   true Lsat_1_v8_lg_8: 122543824-122550264 Lactuca sativa
Lsat_1_v5_gn_8_83900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 122543824-122544323 Lactuca sativa
Lsat_1_v5_gn_8_83900 1.0kb upstream 1.0kb upstream 6941   true Lsat_1_v8_lg_8: 122544324-122551264 Lactuca sativa
Lsat_1_v5_gn_8_83900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 122550265-122551264 Lactuca sativa
Lsat_1_v5_gn_8_83900 1.0kb downstream 1.0kb downstream 6941   true Lsat_1_v8_lg_8: 122543324-122550264 Lactuca sativa
Lsat_1_v5_gn_8_83900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 122543324-122544323 Lactuca sativa
Lsat_1_v5_gn_8_83900 2.0kb upstream 2.0kb upstream 7941   true Lsat_1_v8_lg_8: 122544324-122552264 Lactuca sativa
Lsat_1_v5_gn_8_83900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 122550265-122552264 Lactuca sativa
Lsat_1_v5_gn_8_83900 2.0kb downstream 2.0kb downstream 7941   true Lsat_1_v8_lg_8: 122542324-122550264 Lactuca sativa
Lsat_1_v5_gn_8_83900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 122542324-122544323 Lactuca sativa
Lsat_1_v5_gn_8_83900 5.0kb upstream 5.0kb upstream 10941   true Lsat_1_v8_lg_8: 122544324-122555264 Lactuca sativa
Lsat_1_v5_gn_8_83900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 122550265-122555264 Lactuca sativa
Lsat_1_v5_gn_8_83900 5.0kb downstream 5.0kb downstream 10941   true Lsat_1_v8_lg_8: 122539324-122550264 Lactuca sativa
Lsat_1_v5_gn_8_83900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 122539324-122544323 Lactuca sativa
Lsat_1_v5_gn_8_83900 10.0kb upstream 10.0kb upstream 15941   true Lsat_1_v8_lg_8: 122544324-122560264 Lactuca sativa
Lsat_1_v5_gn_8_83900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 122550265-122560264 Lactuca sativa
Lsat_1_v5_gn_8_83900 10.0kb downstream 10.0kb downstream 15941   true Lsat_1_v8_lg_8: 122534324-122550264 Lactuca sativa
Lsat_1_v5_gn_8_83900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 122534324-122544323 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466593 5263 Asterids View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain