Gene : Lsat_1_v5_gn_8_88260 L. sativa V8
Defline:  (1 of 7) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Genomic Order:  2747
Name:  ? Lsat_1_v5_gn_8_88260 Secondary Identifier:  ? PAC:38956068
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_88260 0.5kb upstream 0.5kb upstream 4459   true Lsat_1_v8_lg_8: 126514715-126519173 Lactuca sativa
Lsat_1_v5_gn_8_88260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 126514715-126515214 Lactuca sativa
Lsat_1_v5_gn_8_88260 0.5kb downstream 0.5kb downstream 4459   true Lsat_1_v8_lg_8: 126515215-126519673 Lactuca sativa
Lsat_1_v5_gn_8_88260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 126519174-126519673 Lactuca sativa
Lsat_1_v5_gn_8_88260 1.0kb upstream 1.0kb upstream 4959   true Lsat_1_v8_lg_8: 126514215-126519173 Lactuca sativa
Lsat_1_v5_gn_8_88260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 126514215-126515214 Lactuca sativa
Lsat_1_v5_gn_8_88260 1.0kb downstream 1.0kb downstream 4959   true Lsat_1_v8_lg_8: 126515215-126520173 Lactuca sativa
Lsat_1_v5_gn_8_88260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 126519174-126520173 Lactuca sativa
Lsat_1_v5_gn_8_88260 2.0kb upstream 2.0kb upstream 5959   true Lsat_1_v8_lg_8: 126513215-126519173 Lactuca sativa
Lsat_1_v5_gn_8_88260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 126513215-126515214 Lactuca sativa
Lsat_1_v5_gn_8_88260 2.0kb downstream 2.0kb downstream 5959   true Lsat_1_v8_lg_8: 126515215-126521173 Lactuca sativa
Lsat_1_v5_gn_8_88260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 126519174-126521173 Lactuca sativa
Lsat_1_v5_gn_8_88260 5.0kb upstream 5.0kb upstream 8959   true Lsat_1_v8_lg_8: 126510215-126519173 Lactuca sativa
Lsat_1_v5_gn_8_88260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 126510215-126515214 Lactuca sativa
Lsat_1_v5_gn_8_88260 5.0kb downstream 5.0kb downstream 8959   true Lsat_1_v8_lg_8: 126515215-126524173 Lactuca sativa
Lsat_1_v5_gn_8_88260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 126519174-126524173 Lactuca sativa
Lsat_1_v5_gn_8_88260 10.0kb upstream 10.0kb upstream 13959   true Lsat_1_v8_lg_8: 126505215-126519173 Lactuca sativa
Lsat_1_v5_gn_8_88260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 126505215-126515214 Lactuca sativa
Lsat_1_v5_gn_8_88260 10.0kb downstream 10.0kb downstream 13959   true Lsat_1_v8_lg_8: 126515215-126529173 Lactuca sativa
Lsat_1_v5_gn_8_88260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 126519174-126529173 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
121477314 5263 Asterids View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain