Gene : Lsat_1_v5_gn_8_88241 L. sativa V8
Defline:  (1 of 2) K01412 - mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] (PMPCA, MAS2) Genomic Order:  2746
Name:  ? Lsat_1_v5_gn_8_88241 Secondary Identifier:  ? PAC:38955173
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_88241 0.5kb upstream 0.5kb upstream 4023   true Lsat_1_v8_lg_8: 126446076-126450098 Lactuca sativa
Lsat_1_v5_gn_8_88241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 126449599-126450098 Lactuca sativa
Lsat_1_v5_gn_8_88241 0.5kb downstream 0.5kb downstream 4023   true Lsat_1_v8_lg_8: 126445576-126449598 Lactuca sativa
Lsat_1_v5_gn_8_88241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 126445576-126446075 Lactuca sativa
Lsat_1_v5_gn_8_88241 1.0kb upstream 1.0kb upstream 4523   true Lsat_1_v8_lg_8: 126446076-126450598 Lactuca sativa
Lsat_1_v5_gn_8_88241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 126449599-126450598 Lactuca sativa
Lsat_1_v5_gn_8_88241 1.0kb downstream 1.0kb downstream 4523   true Lsat_1_v8_lg_8: 126445076-126449598 Lactuca sativa
Lsat_1_v5_gn_8_88241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 126445076-126446075 Lactuca sativa
Lsat_1_v5_gn_8_88241 2.0kb upstream 2.0kb upstream 5523   true Lsat_1_v8_lg_8: 126446076-126451598 Lactuca sativa
Lsat_1_v5_gn_8_88241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 126449599-126451598 Lactuca sativa
Lsat_1_v5_gn_8_88241 2.0kb downstream 2.0kb downstream 5523   true Lsat_1_v8_lg_8: 126444076-126449598 Lactuca sativa
Lsat_1_v5_gn_8_88241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 126444076-126446075 Lactuca sativa
Lsat_1_v5_gn_8_88241 5.0kb upstream 5.0kb upstream 8523   true Lsat_1_v8_lg_8: 126446076-126454598 Lactuca sativa
Lsat_1_v5_gn_8_88241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 126449599-126454598 Lactuca sativa
Lsat_1_v5_gn_8_88241 5.0kb downstream 5.0kb downstream 8523   true Lsat_1_v8_lg_8: 126441076-126449598 Lactuca sativa
Lsat_1_v5_gn_8_88241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 126441076-126446075 Lactuca sativa
Lsat_1_v5_gn_8_88241 10.0kb upstream 10.0kb upstream 13523   true Lsat_1_v8_lg_8: 126446076-126459598 Lactuca sativa
Lsat_1_v5_gn_8_88241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 126449599-126459598 Lactuca sativa
Lsat_1_v5_gn_8_88241 10.0kb downstream 10.0kb downstream 13523   true Lsat_1_v8_lg_8: 126436076-126449598 Lactuca sativa
Lsat_1_v5_gn_8_88241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 126436076-126446075 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
121476207 5263 Asterids View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain