Gene : Lsat_1_v5_gn_8_96880 L. sativa V8
Defline:  (1 of 5) K00029 - malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) (E1.1.1.40, maeB) Genomic Order:  3031
Name:  ? Lsat_1_v5_gn_8_96880 Secondary Identifier:  ? PAC:38955600
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-241 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_96880 0.5kb upstream 0.5kb upstream 4325   true Lsat_1_v8_lg_8: 143303610-143307934 Lactuca sativa
Lsat_1_v5_gn_8_96880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 143303610-143304109 Lactuca sativa
Lsat_1_v5_gn_8_96880 0.5kb downstream 0.5kb downstream 4325   true Lsat_1_v8_lg_8: 143304110-143308434 Lactuca sativa
Lsat_1_v5_gn_8_96880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 143307935-143308434 Lactuca sativa
Lsat_1_v5_gn_8_96880 1.0kb upstream 1.0kb upstream 4825   true Lsat_1_v8_lg_8: 143303110-143307934 Lactuca sativa
Lsat_1_v5_gn_8_96880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 143303110-143304109 Lactuca sativa
Lsat_1_v5_gn_8_96880 1.0kb downstream 1.0kb downstream 4825   true Lsat_1_v8_lg_8: 143304110-143308934 Lactuca sativa
Lsat_1_v5_gn_8_96880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 143307935-143308934 Lactuca sativa
Lsat_1_v5_gn_8_96880 2.0kb upstream 2.0kb upstream 5825   true Lsat_1_v8_lg_8: 143302110-143307934 Lactuca sativa
Lsat_1_v5_gn_8_96880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 143302110-143304109 Lactuca sativa
Lsat_1_v5_gn_8_96880 2.0kb downstream 2.0kb downstream 5825   true Lsat_1_v8_lg_8: 143304110-143309934 Lactuca sativa
Lsat_1_v5_gn_8_96880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 143307935-143309934 Lactuca sativa
Lsat_1_v5_gn_8_96880 5.0kb upstream 5.0kb upstream 8825   true Lsat_1_v8_lg_8: 143299110-143307934 Lactuca sativa
Lsat_1_v5_gn_8_96880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 143299110-143304109 Lactuca sativa
Lsat_1_v5_gn_8_96880 5.0kb downstream 5.0kb downstream 8825   true Lsat_1_v8_lg_8: 143304110-143312934 Lactuca sativa
Lsat_1_v5_gn_8_96880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 143307935-143312934 Lactuca sativa
Lsat_1_v5_gn_8_96880 10.0kb upstream 10.0kb upstream 13825   true Lsat_1_v8_lg_8: 143294110-143307934 Lactuca sativa
Lsat_1_v5_gn_8_96880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 143294110-143304109 Lactuca sativa
Lsat_1_v5_gn_8_96880 10.0kb downstream 10.0kb downstream 13825   true Lsat_1_v8_lg_8: 143304110-143317934 Lactuca sativa
Lsat_1_v5_gn_8_96880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 143307935-143317934 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470365 5263 Asterids View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain