Gene : Lsat_1_v5_gn_8_96901 L. sativa V8
Defline:  (1 of 5) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  3032
Name:  ? Lsat_1_v5_gn_8_96901 Secondary Identifier:  ? PAC:38953296
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ETHYL-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_96901 0.5kb upstream 0.5kb upstream 4405   true Lsat_1_v8_lg_8: 143311517-143315921 Lactuca sativa
Lsat_1_v5_gn_8_96901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 143315422-143315921 Lactuca sativa
Lsat_1_v5_gn_8_96901 0.5kb downstream 0.5kb downstream 4405   true Lsat_1_v8_lg_8: 143311017-143315421 Lactuca sativa
Lsat_1_v5_gn_8_96901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 143311017-143311516 Lactuca sativa
Lsat_1_v5_gn_8_96901 1.0kb upstream 1.0kb upstream 4905   true Lsat_1_v8_lg_8: 143311517-143316421 Lactuca sativa
Lsat_1_v5_gn_8_96901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 143315422-143316421 Lactuca sativa
Lsat_1_v5_gn_8_96901 1.0kb downstream 1.0kb downstream 4905   true Lsat_1_v8_lg_8: 143310517-143315421 Lactuca sativa
Lsat_1_v5_gn_8_96901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 143310517-143311516 Lactuca sativa
Lsat_1_v5_gn_8_96901 2.0kb upstream 2.0kb upstream 5905   true Lsat_1_v8_lg_8: 143311517-143317421 Lactuca sativa
Lsat_1_v5_gn_8_96901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 143315422-143317421 Lactuca sativa
Lsat_1_v5_gn_8_96901 2.0kb downstream 2.0kb downstream 5905   true Lsat_1_v8_lg_8: 143309517-143315421 Lactuca sativa
Lsat_1_v5_gn_8_96901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 143309517-143311516 Lactuca sativa
Lsat_1_v5_gn_8_96901 5.0kb upstream 5.0kb upstream 8905   true Lsat_1_v8_lg_8: 143311517-143320421 Lactuca sativa
Lsat_1_v5_gn_8_96901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 143315422-143320421 Lactuca sativa
Lsat_1_v5_gn_8_96901 5.0kb downstream 5.0kb downstream 8905   true Lsat_1_v8_lg_8: 143306517-143315421 Lactuca sativa
Lsat_1_v5_gn_8_96901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 143306517-143311516 Lactuca sativa
Lsat_1_v5_gn_8_96901 10.0kb upstream 10.0kb upstream 13905   true Lsat_1_v8_lg_8: 143311517-143325421 Lactuca sativa
Lsat_1_v5_gn_8_96901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 143315422-143325421 Lactuca sativa
Lsat_1_v5_gn_8_96901 10.0kb downstream 10.0kb downstream 13905   true Lsat_1_v8_lg_8: 143301517-143315421 Lactuca sativa
Lsat_1_v5_gn_8_96901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 143301517-143311516 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472547 5263 Asterids View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain