Gene : Lsat_1_v5_gn_9_18420 L. sativa V8
Defline:  (1 of 2) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  608
Name:  ? Lsat_1_v5_gn_9_18420 Secondary Identifier:  ? PAC:38925933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_18420 0.5kb upstream 0.5kb upstream 2862   true Lsat_1_v8_lg_9: 19914871-19917732 Lactuca sativa
Lsat_1_v5_gn_9_18420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 19914871-19915370 Lactuca sativa
Lsat_1_v5_gn_9_18420 0.5kb downstream 0.5kb downstream 2862   true Lsat_1_v8_lg_9: 19915371-19918232 Lactuca sativa
Lsat_1_v5_gn_9_18420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 19917733-19918232 Lactuca sativa
Lsat_1_v5_gn_9_18420 1.0kb upstream 1.0kb upstream 3362   true Lsat_1_v8_lg_9: 19914371-19917732 Lactuca sativa
Lsat_1_v5_gn_9_18420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 19914371-19915370 Lactuca sativa
Lsat_1_v5_gn_9_18420 1.0kb downstream 1.0kb downstream 3362   true Lsat_1_v8_lg_9: 19915371-19918732 Lactuca sativa
Lsat_1_v5_gn_9_18420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 19917733-19918732 Lactuca sativa
Lsat_1_v5_gn_9_18420 2.0kb upstream 2.0kb upstream 4362   true Lsat_1_v8_lg_9: 19913371-19917732 Lactuca sativa
Lsat_1_v5_gn_9_18420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 19913371-19915370 Lactuca sativa
Lsat_1_v5_gn_9_18420 2.0kb downstream 2.0kb downstream 4362   true Lsat_1_v8_lg_9: 19915371-19919732 Lactuca sativa
Lsat_1_v5_gn_9_18420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 19917733-19919732 Lactuca sativa
Lsat_1_v5_gn_9_18420 5.0kb upstream 5.0kb upstream 7362   true Lsat_1_v8_lg_9: 19910371-19917732 Lactuca sativa
Lsat_1_v5_gn_9_18420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 19910371-19915370 Lactuca sativa
Lsat_1_v5_gn_9_18420 5.0kb downstream 5.0kb downstream 7362   true Lsat_1_v8_lg_9: 19915371-19922732 Lactuca sativa
Lsat_1_v5_gn_9_18420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 19917733-19922732 Lactuca sativa
Lsat_1_v5_gn_9_18420 10.0kb upstream 10.0kb upstream 12362   true Lsat_1_v8_lg_9: 19905371-19917732 Lactuca sativa
Lsat_1_v5_gn_9_18420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 19905371-19915370 Lactuca sativa
Lsat_1_v5_gn_9_18420 10.0kb downstream 10.0kb downstream 12362   true Lsat_1_v8_lg_9: 19915371-19927732 Lactuca sativa
Lsat_1_v5_gn_9_18420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 19917733-19927732 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
121475314 5263 Asterids View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain