Gene : Lsat_1_v5_gn_9_1881 L. sativa V8
Defline:  (1 of 2) K03679 - exosome complex component RRP4 (RRP4, EXOSC2) Genomic Order:  36
Name:  ? Lsat_1_v5_gn_9_1881 Secondary Identifier:  ? PAC:38926433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_1881 0.5kb upstream 0.5kb upstream 3768   true Lsat_1_v8_lg_9: 870972-874739 Lactuca sativa
Lsat_1_v5_gn_9_1881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 874240-874739 Lactuca sativa
Lsat_1_v5_gn_9_1881 0.5kb downstream 0.5kb downstream 3768   true Lsat_1_v8_lg_9: 870472-874239 Lactuca sativa
Lsat_1_v5_gn_9_1881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 870472-870971 Lactuca sativa
Lsat_1_v5_gn_9_1881 1.0kb upstream 1.0kb upstream 4268   true Lsat_1_v8_lg_9: 870972-875239 Lactuca sativa
Lsat_1_v5_gn_9_1881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 874240-875239 Lactuca sativa
Lsat_1_v5_gn_9_1881 1.0kb downstream 1.0kb downstream 4268   true Lsat_1_v8_lg_9: 869972-874239 Lactuca sativa
Lsat_1_v5_gn_9_1881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 869972-870971 Lactuca sativa
Lsat_1_v5_gn_9_1881 2.0kb upstream 2.0kb upstream 5268   true Lsat_1_v8_lg_9: 870972-876239 Lactuca sativa
Lsat_1_v5_gn_9_1881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 874240-876239 Lactuca sativa
Lsat_1_v5_gn_9_1881 2.0kb downstream 2.0kb downstream 5268   true Lsat_1_v8_lg_9: 868972-874239 Lactuca sativa
Lsat_1_v5_gn_9_1881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 868972-870971 Lactuca sativa
Lsat_1_v5_gn_9_1881 5.0kb upstream 5.0kb upstream 8268   true Lsat_1_v8_lg_9: 870972-879239 Lactuca sativa
Lsat_1_v5_gn_9_1881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 874240-879239 Lactuca sativa
Lsat_1_v5_gn_9_1881 5.0kb downstream 5.0kb downstream 8268   true Lsat_1_v8_lg_9: 865972-874239 Lactuca sativa
Lsat_1_v5_gn_9_1881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 865972-870971 Lactuca sativa
Lsat_1_v5_gn_9_1881 10.0kb upstream 10.0kb upstream 13268   true Lsat_1_v8_lg_9: 870972-884239 Lactuca sativa
Lsat_1_v5_gn_9_1881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 874240-884239 Lactuca sativa
Lsat_1_v5_gn_9_1881 10.0kb downstream 10.0kb downstream 13268   true Lsat_1_v8_lg_9: 860972-874239 Lactuca sativa
Lsat_1_v5_gn_9_1881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 860972-870971 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467101 5263 Asterids View MSA
123736836 5271 Pentapetalae View MSA
122787379 5272 Eudicot View MSA
122042279 5273 Angiosperm View MSA
121344943 5274 Embryophyte View MSA
123428223 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain