Gene : Lsat_1_v5_gn_9_22121 L. sativa V8
Defline:  (1 of 28) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  728
Name:  ? Lsat_1_v5_gn_9_22121 Secondary Identifier:  ? PAC:38923004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_22121 0.5kb upstream 0.5kb upstream 2743   true Lsat_1_v8_lg_9: 24760654-24763396 Lactuca sativa
Lsat_1_v5_gn_9_22121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 24760654-24761153 Lactuca sativa
Lsat_1_v5_gn_9_22121 0.5kb downstream 0.5kb downstream 2743   true Lsat_1_v8_lg_9: 24761154-24763896 Lactuca sativa
Lsat_1_v5_gn_9_22121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 24763397-24763896 Lactuca sativa
Lsat_1_v5_gn_9_22121 1.0kb upstream 1.0kb upstream 3243   true Lsat_1_v8_lg_9: 24760154-24763396 Lactuca sativa
Lsat_1_v5_gn_9_22121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 24760154-24761153 Lactuca sativa
Lsat_1_v5_gn_9_22121 1.0kb downstream 1.0kb downstream 3243   true Lsat_1_v8_lg_9: 24761154-24764396 Lactuca sativa
Lsat_1_v5_gn_9_22121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 24763397-24764396 Lactuca sativa
Lsat_1_v5_gn_9_22121 2.0kb upstream 2.0kb upstream 4243   true Lsat_1_v8_lg_9: 24759154-24763396 Lactuca sativa
Lsat_1_v5_gn_9_22121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 24759154-24761153 Lactuca sativa
Lsat_1_v5_gn_9_22121 2.0kb downstream 2.0kb downstream 4243   true Lsat_1_v8_lg_9: 24761154-24765396 Lactuca sativa
Lsat_1_v5_gn_9_22121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 24763397-24765396 Lactuca sativa
Lsat_1_v5_gn_9_22121 5.0kb upstream 5.0kb upstream 7243   true Lsat_1_v8_lg_9: 24756154-24763396 Lactuca sativa
Lsat_1_v5_gn_9_22121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 24756154-24761153 Lactuca sativa
Lsat_1_v5_gn_9_22121 5.0kb downstream 5.0kb downstream 7243   true Lsat_1_v8_lg_9: 24761154-24768396 Lactuca sativa
Lsat_1_v5_gn_9_22121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 24763397-24768396 Lactuca sativa
Lsat_1_v5_gn_9_22121 10.0kb upstream 10.0kb upstream 12243   true Lsat_1_v8_lg_9: 24751154-24763396 Lactuca sativa
Lsat_1_v5_gn_9_22121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 24751154-24761153 Lactuca sativa
Lsat_1_v5_gn_9_22121 10.0kb downstream 10.0kb downstream 12243   true Lsat_1_v8_lg_9: 24761154-24773396 Lactuca sativa
Lsat_1_v5_gn_9_22121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 24763397-24773396 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470868 5263 Asterids View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain