Gene : Lsat_1_v5_gn_9_23360 L. sativa V8
Defline:  (1 of 3) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // SUBFAMILY NOT NAMED Genomic Order:  776
Name:  ? Lsat_1_v5_gn_9_23360 Secondary Identifier:  ? PAC:38925350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_23360 0.5kb upstream 0.5kb upstream 2825   true Lsat_1_v8_lg_9: 26591903-26594727 Lactuca sativa
Lsat_1_v5_gn_9_23360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 26591903-26592402 Lactuca sativa
Lsat_1_v5_gn_9_23360 0.5kb downstream 0.5kb downstream 2825   true Lsat_1_v8_lg_9: 26592403-26595227 Lactuca sativa
Lsat_1_v5_gn_9_23360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 26594728-26595227 Lactuca sativa
Lsat_1_v5_gn_9_23360 1.0kb upstream 1.0kb upstream 3325   true Lsat_1_v8_lg_9: 26591403-26594727 Lactuca sativa
Lsat_1_v5_gn_9_23360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 26591403-26592402 Lactuca sativa
Lsat_1_v5_gn_9_23360 1.0kb downstream 1.0kb downstream 3325   true Lsat_1_v8_lg_9: 26592403-26595727 Lactuca sativa
Lsat_1_v5_gn_9_23360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 26594728-26595727 Lactuca sativa
Lsat_1_v5_gn_9_23360 2.0kb upstream 2.0kb upstream 4325   true Lsat_1_v8_lg_9: 26590403-26594727 Lactuca sativa
Lsat_1_v5_gn_9_23360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 26590403-26592402 Lactuca sativa
Lsat_1_v5_gn_9_23360 2.0kb downstream 2.0kb downstream 4325   true Lsat_1_v8_lg_9: 26592403-26596727 Lactuca sativa
Lsat_1_v5_gn_9_23360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 26594728-26596727 Lactuca sativa
Lsat_1_v5_gn_9_23360 5.0kb upstream 5.0kb upstream 7325   true Lsat_1_v8_lg_9: 26587403-26594727 Lactuca sativa
Lsat_1_v5_gn_9_23360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 26587403-26592402 Lactuca sativa
Lsat_1_v5_gn_9_23360 5.0kb downstream 5.0kb downstream 7325   true Lsat_1_v8_lg_9: 26592403-26599727 Lactuca sativa
Lsat_1_v5_gn_9_23360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 26594728-26599727 Lactuca sativa
Lsat_1_v5_gn_9_23360 10.0kb upstream 10.0kb upstream 12325   true Lsat_1_v8_lg_9: 26582403-26594727 Lactuca sativa
Lsat_1_v5_gn_9_23360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 26582403-26592402 Lactuca sativa
Lsat_1_v5_gn_9_23360 10.0kb downstream 10.0kb downstream 12325   true Lsat_1_v8_lg_9: 26592403-26604727 Lactuca sativa
Lsat_1_v5_gn_9_23360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 26594728-26604727 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467213 5263 Asterids View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain