Gene : Lsat_1_v5_gn_9_23160 L. sativa V8
Defline:  (1 of 3) PTHR24128//PTHR24128:SF14 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  768
Name:  ? Lsat_1_v5_gn_9_23160 Secondary Identifier:  ? PAC:38927514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_23160 0.5kb upstream 0.5kb upstream 3427   true Lsat_1_v8_lg_9: 26090647-26094073 Lactuca sativa
Lsat_1_v5_gn_9_23160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 26090647-26091146 Lactuca sativa
Lsat_1_v5_gn_9_23160 0.5kb downstream 0.5kb downstream 3427   true Lsat_1_v8_lg_9: 26091147-26094573 Lactuca sativa
Lsat_1_v5_gn_9_23160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 26094074-26094573 Lactuca sativa
Lsat_1_v5_gn_9_23160 1.0kb upstream 1.0kb upstream 3927   true Lsat_1_v8_lg_9: 26090147-26094073 Lactuca sativa
Lsat_1_v5_gn_9_23160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 26090147-26091146 Lactuca sativa
Lsat_1_v5_gn_9_23160 1.0kb downstream 1.0kb downstream 3927   true Lsat_1_v8_lg_9: 26091147-26095073 Lactuca sativa
Lsat_1_v5_gn_9_23160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 26094074-26095073 Lactuca sativa
Lsat_1_v5_gn_9_23160 2.0kb upstream 2.0kb upstream 4927   true Lsat_1_v8_lg_9: 26089147-26094073 Lactuca sativa
Lsat_1_v5_gn_9_23160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 26089147-26091146 Lactuca sativa
Lsat_1_v5_gn_9_23160 2.0kb downstream 2.0kb downstream 4927   true Lsat_1_v8_lg_9: 26091147-26096073 Lactuca sativa
Lsat_1_v5_gn_9_23160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 26094074-26096073 Lactuca sativa
Lsat_1_v5_gn_9_23160 5.0kb upstream 5.0kb upstream 7927   true Lsat_1_v8_lg_9: 26086147-26094073 Lactuca sativa
Lsat_1_v5_gn_9_23160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 26086147-26091146 Lactuca sativa
Lsat_1_v5_gn_9_23160 5.0kb downstream 5.0kb downstream 7927   true Lsat_1_v8_lg_9: 26091147-26099073 Lactuca sativa
Lsat_1_v5_gn_9_23160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 26094074-26099073 Lactuca sativa
Lsat_1_v5_gn_9_23160 10.0kb upstream 10.0kb upstream 12927   true Lsat_1_v8_lg_9: 26081147-26094073 Lactuca sativa
Lsat_1_v5_gn_9_23160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 26081147-26091146 Lactuca sativa
Lsat_1_v5_gn_9_23160 10.0kb downstream 10.0kb downstream 12927   true Lsat_1_v8_lg_9: 26091147-26104073 Lactuca sativa
Lsat_1_v5_gn_9_23160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 26094074-26104073 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474081 5263 Asterids View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain