Gene : Lsat_1_v5_gn_9_24820 L. sativa V8
Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Genomic Order:  814
Name:  ? Lsat_1_v5_gn_9_24820 Secondary Identifier:  ? PAC:38923370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_24820 0.5kb upstream 0.5kb upstream 4094   true Lsat_1_v8_lg_9: 28239479-28243572 Lactuca sativa
Lsat_1_v5_gn_9_24820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 28239479-28239978 Lactuca sativa
Lsat_1_v5_gn_9_24820 0.5kb downstream 0.5kb downstream 4094   true Lsat_1_v8_lg_9: 28239979-28244072 Lactuca sativa
Lsat_1_v5_gn_9_24820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 28243573-28244072 Lactuca sativa
Lsat_1_v5_gn_9_24820 1.0kb upstream 1.0kb upstream 4594   true Lsat_1_v8_lg_9: 28238979-28243572 Lactuca sativa
Lsat_1_v5_gn_9_24820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 28238979-28239978 Lactuca sativa
Lsat_1_v5_gn_9_24820 1.0kb downstream 1.0kb downstream 4594   true Lsat_1_v8_lg_9: 28239979-28244572 Lactuca sativa
Lsat_1_v5_gn_9_24820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 28243573-28244572 Lactuca sativa
Lsat_1_v5_gn_9_24820 2.0kb upstream 2.0kb upstream 5594   true Lsat_1_v8_lg_9: 28237979-28243572 Lactuca sativa
Lsat_1_v5_gn_9_24820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 28237979-28239978 Lactuca sativa
Lsat_1_v5_gn_9_24820 2.0kb downstream 2.0kb downstream 5594   true Lsat_1_v8_lg_9: 28239979-28245572 Lactuca sativa
Lsat_1_v5_gn_9_24820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 28243573-28245572 Lactuca sativa
Lsat_1_v5_gn_9_24820 5.0kb upstream 5.0kb upstream 8594   true Lsat_1_v8_lg_9: 28234979-28243572 Lactuca sativa
Lsat_1_v5_gn_9_24820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 28234979-28239978 Lactuca sativa
Lsat_1_v5_gn_9_24820 5.0kb downstream 5.0kb downstream 8594   true Lsat_1_v8_lg_9: 28239979-28248572 Lactuca sativa
Lsat_1_v5_gn_9_24820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 28243573-28248572 Lactuca sativa
Lsat_1_v5_gn_9_24820 10.0kb upstream 10.0kb upstream 13594   true Lsat_1_v8_lg_9: 28229979-28243572 Lactuca sativa
Lsat_1_v5_gn_9_24820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 28229979-28239978 Lactuca sativa
Lsat_1_v5_gn_9_24820 10.0kb downstream 10.0kb downstream 13594   true Lsat_1_v8_lg_9: 28239979-28253572 Lactuca sativa
Lsat_1_v5_gn_9_24820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 28243573-28253572 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476555 5263 Asterids View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain