Gene : Lsat_1_v5_gn_9_27320 L. sativa V8
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  934
Name:  ? Lsat_1_v5_gn_9_27320 Secondary Identifier:  ? PAC:38925473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_27320 0.5kb upstream 0.5kb upstream 3939   true Lsat_1_v8_lg_9: 31824123-31828061 Lactuca sativa
Lsat_1_v5_gn_9_27320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 31827562-31828061 Lactuca sativa
Lsat_1_v5_gn_9_27320 0.5kb downstream 0.5kb downstream 3939   true Lsat_1_v8_lg_9: 31823623-31827561 Lactuca sativa
Lsat_1_v5_gn_9_27320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 31823623-31824122 Lactuca sativa
Lsat_1_v5_gn_9_27320 1.0kb upstream 1.0kb upstream 4439   true Lsat_1_v8_lg_9: 31824123-31828561 Lactuca sativa
Lsat_1_v5_gn_9_27320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 31827562-31828561 Lactuca sativa
Lsat_1_v5_gn_9_27320 1.0kb downstream 1.0kb downstream 4439   true Lsat_1_v8_lg_9: 31823123-31827561 Lactuca sativa
Lsat_1_v5_gn_9_27320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 31823123-31824122 Lactuca sativa
Lsat_1_v5_gn_9_27320 2.0kb upstream 2.0kb upstream 5439   true Lsat_1_v8_lg_9: 31824123-31829561 Lactuca sativa
Lsat_1_v5_gn_9_27320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 31827562-31829561 Lactuca sativa
Lsat_1_v5_gn_9_27320 2.0kb downstream 2.0kb downstream 5439   true Lsat_1_v8_lg_9: 31822123-31827561 Lactuca sativa
Lsat_1_v5_gn_9_27320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 31822123-31824122 Lactuca sativa
Lsat_1_v5_gn_9_27320 5.0kb upstream 5.0kb upstream 8439   true Lsat_1_v8_lg_9: 31824123-31832561 Lactuca sativa
Lsat_1_v5_gn_9_27320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 31827562-31832561 Lactuca sativa
Lsat_1_v5_gn_9_27320 5.0kb downstream 5.0kb downstream 8439   true Lsat_1_v8_lg_9: 31819123-31827561 Lactuca sativa
Lsat_1_v5_gn_9_27320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 31819123-31824122 Lactuca sativa
Lsat_1_v5_gn_9_27320 10.0kb upstream 10.0kb upstream 13439   true Lsat_1_v8_lg_9: 31824123-31837561 Lactuca sativa
Lsat_1_v5_gn_9_27320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 31827562-31837561 Lactuca sativa
Lsat_1_v5_gn_9_27320 10.0kb downstream 10.0kb downstream 13439   true Lsat_1_v8_lg_9: 31814123-31827561 Lactuca sativa
Lsat_1_v5_gn_9_27320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 31814123-31824122 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468675 5263 Asterids View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain