Gene : Lsat_1_v5_gn_9_27960 L. sativa V8
Defline:  (1 of 1) PTHR16052//PTHR16052:SF0 - UNCHARACTERIZED // TBCC DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  894
Name:  ? Lsat_1_v5_gn_9_27960 Secondary Identifier:  ? PAC:38923422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_27960 0.5kb upstream 0.5kb upstream 4756   true Lsat_1_v8_lg_9: 30342897-30347652 Lactuca sativa
Lsat_1_v5_gn_9_27960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 30347153-30347652 Lactuca sativa
Lsat_1_v5_gn_9_27960 0.5kb downstream 0.5kb downstream 4756   true Lsat_1_v8_lg_9: 30342397-30347152 Lactuca sativa
Lsat_1_v5_gn_9_27960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 30342397-30342896 Lactuca sativa
Lsat_1_v5_gn_9_27960 1.0kb upstream 1.0kb upstream 5256   true Lsat_1_v8_lg_9: 30342897-30348152 Lactuca sativa
Lsat_1_v5_gn_9_27960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 30347153-30348152 Lactuca sativa
Lsat_1_v5_gn_9_27960 1.0kb downstream 1.0kb downstream 5256   true Lsat_1_v8_lg_9: 30341897-30347152 Lactuca sativa
Lsat_1_v5_gn_9_27960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 30341897-30342896 Lactuca sativa
Lsat_1_v5_gn_9_27960 2.0kb upstream 2.0kb upstream 6256   true Lsat_1_v8_lg_9: 30342897-30349152 Lactuca sativa
Lsat_1_v5_gn_9_27960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 30347153-30349152 Lactuca sativa
Lsat_1_v5_gn_9_27960 2.0kb downstream 2.0kb downstream 6256   true Lsat_1_v8_lg_9: 30340897-30347152 Lactuca sativa
Lsat_1_v5_gn_9_27960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 30340897-30342896 Lactuca sativa
Lsat_1_v5_gn_9_27960 5.0kb upstream 5.0kb upstream 9256   true Lsat_1_v8_lg_9: 30342897-30352152 Lactuca sativa
Lsat_1_v5_gn_9_27960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 30347153-30352152 Lactuca sativa
Lsat_1_v5_gn_9_27960 5.0kb downstream 5.0kb downstream 9256   true Lsat_1_v8_lg_9: 30337897-30347152 Lactuca sativa
Lsat_1_v5_gn_9_27960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 30337897-30342896 Lactuca sativa
Lsat_1_v5_gn_9_27960 10.0kb upstream 10.0kb upstream 14256   true Lsat_1_v8_lg_9: 30342897-30357152 Lactuca sativa
Lsat_1_v5_gn_9_27960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 30347153-30357152 Lactuca sativa
Lsat_1_v5_gn_9_27960 10.0kb downstream 10.0kb downstream 14256   true Lsat_1_v8_lg_9: 30332897-30347152 Lactuca sativa
Lsat_1_v5_gn_9_27960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 30332897-30342896 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453655 5263 Asterids View MSA
123719501 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain