Gene : Lsat_1_v5_gn_9_29041 L. sativa V8
Defline:  (1 of 2) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  958
Name:  ? Lsat_1_v5_gn_9_29041 Secondary Identifier:  ? PAC:38925696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_29041 0.5kb upstream 0.5kb upstream 3714   true Lsat_1_v8_lg_9: 32170469-32174182 Lactuca sativa
Lsat_1_v5_gn_9_29041 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 32173683-32174182 Lactuca sativa
Lsat_1_v5_gn_9_29041 0.5kb downstream 0.5kb downstream 3714   true Lsat_1_v8_lg_9: 32169969-32173682 Lactuca sativa
Lsat_1_v5_gn_9_29041 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 32169969-32170468 Lactuca sativa
Lsat_1_v5_gn_9_29041 1.0kb upstream 1.0kb upstream 4214   true Lsat_1_v8_lg_9: 32170469-32174682 Lactuca sativa
Lsat_1_v5_gn_9_29041 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 32173683-32174682 Lactuca sativa
Lsat_1_v5_gn_9_29041 1.0kb downstream 1.0kb downstream 4214   true Lsat_1_v8_lg_9: 32169469-32173682 Lactuca sativa
Lsat_1_v5_gn_9_29041 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 32169469-32170468 Lactuca sativa
Lsat_1_v5_gn_9_29041 2.0kb upstream 2.0kb upstream 5214   true Lsat_1_v8_lg_9: 32170469-32175682 Lactuca sativa
Lsat_1_v5_gn_9_29041 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 32173683-32175682 Lactuca sativa
Lsat_1_v5_gn_9_29041 2.0kb downstream 2.0kb downstream 5214   true Lsat_1_v8_lg_9: 32168469-32173682 Lactuca sativa
Lsat_1_v5_gn_9_29041 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 32168469-32170468 Lactuca sativa
Lsat_1_v5_gn_9_29041 5.0kb upstream 5.0kb upstream 8214   true Lsat_1_v8_lg_9: 32170469-32178682 Lactuca sativa
Lsat_1_v5_gn_9_29041 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 32173683-32178682 Lactuca sativa
Lsat_1_v5_gn_9_29041 5.0kb downstream 5.0kb downstream 8214   true Lsat_1_v8_lg_9: 32165469-32173682 Lactuca sativa
Lsat_1_v5_gn_9_29041 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 32165469-32170468 Lactuca sativa
Lsat_1_v5_gn_9_29041 10.0kb upstream 10.0kb upstream 13214   true Lsat_1_v8_lg_9: 32170469-32183682 Lactuca sativa
Lsat_1_v5_gn_9_29041 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 32173683-32183682 Lactuca sativa
Lsat_1_v5_gn_9_29041 10.0kb downstream 10.0kb downstream 13214   true Lsat_1_v8_lg_9: 32160469-32173682 Lactuca sativa
Lsat_1_v5_gn_9_29041 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 32160469-32170468 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475069 5263 Asterids View MSA
123745860 5271 Pentapetalae View MSA
122790423 5272 Eudicot View MSA
122044910 5273 Angiosperm View MSA
121350104 5274 Embryophyte View MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain