Gene : Lsat_1_v5_gn_9_30661 L. sativa V8
Defline:  (1 of 3) PTHR10015//PTHR10015:SF166 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  969
Name:  ? Lsat_1_v5_gn_9_30661 Secondary Identifier:  ? PAC:38927482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_30661 0.5kb upstream 0.5kb upstream 2168   true Lsat_1_v8_lg_9: 32666257-32668424 Lactuca sativa
Lsat_1_v5_gn_9_30661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 32667925-32668424 Lactuca sativa
Lsat_1_v5_gn_9_30661 0.5kb downstream 0.5kb downstream 2168   true Lsat_1_v8_lg_9: 32665757-32667924 Lactuca sativa
Lsat_1_v5_gn_9_30661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 32665757-32666256 Lactuca sativa
Lsat_1_v5_gn_9_30661 1.0kb upstream 1.0kb upstream 2668   true Lsat_1_v8_lg_9: 32666257-32668924 Lactuca sativa
Lsat_1_v5_gn_9_30661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 32667925-32668924 Lactuca sativa
Lsat_1_v5_gn_9_30661 1.0kb downstream 1.0kb downstream 2668   true Lsat_1_v8_lg_9: 32665257-32667924 Lactuca sativa
Lsat_1_v5_gn_9_30661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 32665257-32666256 Lactuca sativa
Lsat_1_v5_gn_9_30661 2.0kb upstream 2.0kb upstream 3668   true Lsat_1_v8_lg_9: 32666257-32669924 Lactuca sativa
Lsat_1_v5_gn_9_30661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 32667925-32669924 Lactuca sativa
Lsat_1_v5_gn_9_30661 2.0kb downstream 2.0kb downstream 3668   true Lsat_1_v8_lg_9: 32664257-32667924 Lactuca sativa
Lsat_1_v5_gn_9_30661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 32664257-32666256 Lactuca sativa
Lsat_1_v5_gn_9_30661 5.0kb upstream 5.0kb upstream 6668   true Lsat_1_v8_lg_9: 32666257-32672924 Lactuca sativa
Lsat_1_v5_gn_9_30661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 32667925-32672924 Lactuca sativa
Lsat_1_v5_gn_9_30661 5.0kb downstream 5.0kb downstream 6668   true Lsat_1_v8_lg_9: 32661257-32667924 Lactuca sativa
Lsat_1_v5_gn_9_30661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 32661257-32666256 Lactuca sativa
Lsat_1_v5_gn_9_30661 10.0kb upstream 10.0kb upstream 11668   true Lsat_1_v8_lg_9: 32666257-32677924 Lactuca sativa
Lsat_1_v5_gn_9_30661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 32667925-32677924 Lactuca sativa
Lsat_1_v5_gn_9_30661 10.0kb downstream 10.0kb downstream 11668   true Lsat_1_v8_lg_9: 32656257-32667924 Lactuca sativa
Lsat_1_v5_gn_9_30661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 32656257-32666256 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791756 5273 Angiosperm View MSA
121478083 5263 Asterids View MSA
123748156 5271 Pentapetalae View MSA
122789855 5272 Eudicot View MSA
121063053 5274 Embryophyte View MSA
123102839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain