Gene : Lsat_1_v5_gn_9_33460 L. sativa V8
Defline:  (1 of 2) K03141 - transcription initiation factor TFIIH subunit 1 (TFIIH1, GTF2H1, TFB1) Genomic Order:  1092
Name:  ? Lsat_1_v5_gn_9_33460 Secondary Identifier:  ? PAC:38926295
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_33460 0.5kb upstream 0.5kb upstream 4718   true Lsat_1_v8_lg_9: 35830447-35835164 Lactuca sativa
Lsat_1_v5_gn_9_33460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 35834665-35835164 Lactuca sativa
Lsat_1_v5_gn_9_33460 0.5kb downstream 0.5kb downstream 4718   true Lsat_1_v8_lg_9: 35829947-35834664 Lactuca sativa
Lsat_1_v5_gn_9_33460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 35829947-35830446 Lactuca sativa
Lsat_1_v5_gn_9_33460 1.0kb upstream 1.0kb upstream 5218   true Lsat_1_v8_lg_9: 35830447-35835664 Lactuca sativa
Lsat_1_v5_gn_9_33460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 35834665-35835664 Lactuca sativa
Lsat_1_v5_gn_9_33460 1.0kb downstream 1.0kb downstream 5218   true Lsat_1_v8_lg_9: 35829447-35834664 Lactuca sativa
Lsat_1_v5_gn_9_33460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 35829447-35830446 Lactuca sativa
Lsat_1_v5_gn_9_33460 2.0kb upstream 2.0kb upstream 6218   true Lsat_1_v8_lg_9: 35830447-35836664 Lactuca sativa
Lsat_1_v5_gn_9_33460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 35834665-35836664 Lactuca sativa
Lsat_1_v5_gn_9_33460 2.0kb downstream 2.0kb downstream 6218   true Lsat_1_v8_lg_9: 35828447-35834664 Lactuca sativa
Lsat_1_v5_gn_9_33460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 35828447-35830446 Lactuca sativa
Lsat_1_v5_gn_9_33460 5.0kb upstream 5.0kb upstream 9218   true Lsat_1_v8_lg_9: 35830447-35839664 Lactuca sativa
Lsat_1_v5_gn_9_33460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 35834665-35839664 Lactuca sativa
Lsat_1_v5_gn_9_33460 5.0kb downstream 5.0kb downstream 9218   true Lsat_1_v8_lg_9: 35825447-35834664 Lactuca sativa
Lsat_1_v5_gn_9_33460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 35825447-35830446 Lactuca sativa
Lsat_1_v5_gn_9_33460 10.0kb upstream 10.0kb upstream 14218   true Lsat_1_v8_lg_9: 35830447-35844664 Lactuca sativa
Lsat_1_v5_gn_9_33460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 35834665-35844664 Lactuca sativa
Lsat_1_v5_gn_9_33460 10.0kb downstream 10.0kb downstream 14218   true Lsat_1_v8_lg_9: 35820447-35834664 Lactuca sativa
Lsat_1_v5_gn_9_33460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 35820447-35830446 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469851 5263 Asterids View MSA
123738244 5271 Pentapetalae View MSA
122787782 5272 Eudicot View MSA
122047682 5273 Angiosperm View MSA
121347472 5274 Embryophyte View MSA
123425427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain