Gene : Lsat_1_v5_gn_9_3440 L. sativa V8
Defline:  (1 of 15) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  85
Name:  ? Lsat_1_v5_gn_9_3440 Secondary Identifier:  ? PAC:38922638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_3440 0.5kb upstream 0.5kb upstream 1866   true Lsat_1_v8_lg_9: 1973003-1974868 Lactuca sativa
Lsat_1_v5_gn_9_3440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 1974369-1974868 Lactuca sativa
Lsat_1_v5_gn_9_3440 0.5kb downstream 0.5kb downstream 1866   true Lsat_1_v8_lg_9: 1972503-1974368 Lactuca sativa
Lsat_1_v5_gn_9_3440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 1972503-1973002 Lactuca sativa
Lsat_1_v5_gn_9_3440 1.0kb upstream 1.0kb upstream 2366   true Lsat_1_v8_lg_9: 1973003-1975368 Lactuca sativa
Lsat_1_v5_gn_9_3440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 1974369-1975368 Lactuca sativa
Lsat_1_v5_gn_9_3440 1.0kb downstream 1.0kb downstream 2366   true Lsat_1_v8_lg_9: 1972003-1974368 Lactuca sativa
Lsat_1_v5_gn_9_3440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 1972003-1973002 Lactuca sativa
Lsat_1_v5_gn_9_3440 2.0kb upstream 2.0kb upstream 3366   true Lsat_1_v8_lg_9: 1973003-1976368 Lactuca sativa
Lsat_1_v5_gn_9_3440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 1974369-1976368 Lactuca sativa
Lsat_1_v5_gn_9_3440 2.0kb downstream 2.0kb downstream 3366   true Lsat_1_v8_lg_9: 1971003-1974368 Lactuca sativa
Lsat_1_v5_gn_9_3440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 1971003-1973002 Lactuca sativa
Lsat_1_v5_gn_9_3440 5.0kb upstream 5.0kb upstream 6366   true Lsat_1_v8_lg_9: 1973003-1979368 Lactuca sativa
Lsat_1_v5_gn_9_3440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 1974369-1979368 Lactuca sativa
Lsat_1_v5_gn_9_3440 5.0kb downstream 5.0kb downstream 6366   true Lsat_1_v8_lg_9: 1968003-1974368 Lactuca sativa
Lsat_1_v5_gn_9_3440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 1968003-1973002 Lactuca sativa
Lsat_1_v5_gn_9_3440 10.0kb upstream 10.0kb upstream 11366   true Lsat_1_v8_lg_9: 1973003-1984368 Lactuca sativa
Lsat_1_v5_gn_9_3440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 1974369-1984368 Lactuca sativa
Lsat_1_v5_gn_9_3440 10.0kb downstream 10.0kb downstream 11366   true Lsat_1_v8_lg_9: 1963003-1974368 Lactuca sativa
Lsat_1_v5_gn_9_3440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 1963003-1973002 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479365 5263 Asterids View MSA
123749881 5271 Pentapetalae View MSA
122794470 5272 Eudicot View MSA
122042584 5273 Angiosperm View MSA
121347178 5274 Embryophyte View MSA
123380504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain