Gene : Lsat_1_v5_gn_9_117441 L. sativa V8
Defline:  (1 of 2) PTHR21649//PTHR21649:SF2 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN Genomic Order:  3660
Name:  ? Lsat_1_v5_gn_9_117441 Secondary Identifier:  ? PAC:38923121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_117441 0.5kb upstream 0.5kb upstream 2145   true Lsat_1_v8_lg_9: 190256856-190259000 Lactuca sativa
Lsat_1_v5_gn_9_117441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 190258501-190259000 Lactuca sativa
Lsat_1_v5_gn_9_117441 0.5kb downstream 0.5kb downstream 2145   true Lsat_1_v8_lg_9: 190256356-190258500 Lactuca sativa
Lsat_1_v5_gn_9_117441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 190256356-190256855 Lactuca sativa
Lsat_1_v5_gn_9_117441 1.0kb upstream 1.0kb upstream 2645   true Lsat_1_v8_lg_9: 190256856-190259500 Lactuca sativa
Lsat_1_v5_gn_9_117441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 190258501-190259500 Lactuca sativa
Lsat_1_v5_gn_9_117441 1.0kb downstream 1.0kb downstream 2645   true Lsat_1_v8_lg_9: 190255856-190258500 Lactuca sativa
Lsat_1_v5_gn_9_117441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 190255856-190256855 Lactuca sativa
Lsat_1_v5_gn_9_117441 2.0kb upstream 2.0kb upstream 3645   true Lsat_1_v8_lg_9: 190256856-190260500 Lactuca sativa
Lsat_1_v5_gn_9_117441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 190258501-190260500 Lactuca sativa
Lsat_1_v5_gn_9_117441 2.0kb downstream 2.0kb downstream 3645   true Lsat_1_v8_lg_9: 190254856-190258500 Lactuca sativa
Lsat_1_v5_gn_9_117441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 190254856-190256855 Lactuca sativa
Lsat_1_v5_gn_9_117441 5.0kb upstream 5.0kb upstream 6645   true Lsat_1_v8_lg_9: 190256856-190263500 Lactuca sativa
Lsat_1_v5_gn_9_117441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 190258501-190263500 Lactuca sativa
Lsat_1_v5_gn_9_117441 5.0kb downstream 5.0kb downstream 6645   true Lsat_1_v8_lg_9: 190251856-190258500 Lactuca sativa
Lsat_1_v5_gn_9_117441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 190251856-190256855 Lactuca sativa
Lsat_1_v5_gn_9_117441 10.0kb upstream 10.0kb upstream 11645   true Lsat_1_v8_lg_9: 190256856-190268500 Lactuca sativa
Lsat_1_v5_gn_9_117441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 190258501-190268500 Lactuca sativa
Lsat_1_v5_gn_9_117441 10.0kb downstream 10.0kb downstream 11645   true Lsat_1_v8_lg_9: 190246856-190258500 Lactuca sativa
Lsat_1_v5_gn_9_117441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 190246856-190256855 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469178 5263 Asterids View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain