Gene : Lsat_1_v5_gn_9_118381 L. sativa V8
Defline:  (1 of 4) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3702
Name:  ? Lsat_1_v5_gn_9_118381 Secondary Identifier:  ? PAC:38924289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_118381 0.5kb upstream 0.5kb upstream 2393   true Lsat_1_v8_lg_9: 191912066-191914458 Lactuca sativa
Lsat_1_v5_gn_9_118381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 191913959-191914458 Lactuca sativa
Lsat_1_v5_gn_9_118381 0.5kb downstream 0.5kb downstream 2393   true Lsat_1_v8_lg_9: 191911566-191913958 Lactuca sativa
Lsat_1_v5_gn_9_118381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 191911566-191912065 Lactuca sativa
Lsat_1_v5_gn_9_118381 1.0kb upstream 1.0kb upstream 2893   true Lsat_1_v8_lg_9: 191912066-191914958 Lactuca sativa
Lsat_1_v5_gn_9_118381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 191913959-191914958 Lactuca sativa
Lsat_1_v5_gn_9_118381 1.0kb downstream 1.0kb downstream 2893   true Lsat_1_v8_lg_9: 191911066-191913958 Lactuca sativa
Lsat_1_v5_gn_9_118381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 191911066-191912065 Lactuca sativa
Lsat_1_v5_gn_9_118381 2.0kb upstream 2.0kb upstream 3893   true Lsat_1_v8_lg_9: 191912066-191915958 Lactuca sativa
Lsat_1_v5_gn_9_118381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 191913959-191915958 Lactuca sativa
Lsat_1_v5_gn_9_118381 2.0kb downstream 2.0kb downstream 3893   true Lsat_1_v8_lg_9: 191910066-191913958 Lactuca sativa
Lsat_1_v5_gn_9_118381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 191910066-191912065 Lactuca sativa
Lsat_1_v5_gn_9_118381 5.0kb upstream 5.0kb upstream 6893   true Lsat_1_v8_lg_9: 191912066-191918958 Lactuca sativa
Lsat_1_v5_gn_9_118381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 191913959-191918958 Lactuca sativa
Lsat_1_v5_gn_9_118381 5.0kb downstream 5.0kb downstream 6893   true Lsat_1_v8_lg_9: 191907066-191913958 Lactuca sativa
Lsat_1_v5_gn_9_118381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 191907066-191912065 Lactuca sativa
Lsat_1_v5_gn_9_118381 10.0kb upstream 10.0kb upstream 11893   true Lsat_1_v8_lg_9: 191912066-191923958 Lactuca sativa
Lsat_1_v5_gn_9_118381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 191913959-191923958 Lactuca sativa
Lsat_1_v5_gn_9_118381 10.0kb downstream 10.0kb downstream 11893   true Lsat_1_v8_lg_9: 191902066-191913958 Lactuca sativa
Lsat_1_v5_gn_9_118381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 191902066-191912065 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474605 5263 Asterids View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain